PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022997885.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | SBP | ||||||||
Protein Properties | Length: 462aa MW: 51976.2 Da PI: 8.3679 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 127 | 7.4e-40 | 172 | 248 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC++d+s++k+y+r+h+vCe hsk+p+v++ g e+rfCqqCsrfh++sefD +krsCrrrL++hn+rrrk+q+ XP_022997885.1 172 CQVEGCNMDISNVKDYYRKHRVCESHSKSPKVIIGGFERRFCQQCSRFHSISEFDGKKRSCRRRLSNHNARRRKPQS 248 **************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 462 aa Download sequence |
MEWNARPPLQ WDWDNLTVLN PSYSEHSDVL HPTFFQTKHG INSGPSNSAG DDRTTGGPFF 60 KLGQTSPKIS KSVSTNSSFF EKSRTTKFTL EGFEPTLEDS CNKKEFVEAE VVSTYGTPET 120 STCSCEPMLS LKLGKQAYFE NASAVNLTKP SALMVESRAT RKRCQNTPSA HCQVEGCNMD 180 ISNVKDYYRK HRVCESHSKS PKVIIGGFER RFCQQCSRFH SISEFDGKKR SCRRRLSNHN 240 ARRRKPQSKV VGLNPARLSS WDFENRQIDI FSDKLSLIYP TPNEKSAWES AFSSRHPQCG 300 KYVSKPEPTY GSIGQLNVSE DEMCYVHAMP YHDNTSKAVP FKGAATKILD PAQDLQRALS 360 LLSTDTKGPY EARLFAPDNP NRLVNPNYAN QPSISQSPMN LGIQTLPFAS VDSQSWGNGH 420 HHPIELQMQI HHPNIEGGNN LFQDFQLFKT PCEIGMFSNQ IS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 228 | 245 | KKRSCRRRLSNHNARRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 3e-46 | SBP family protein |