PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022997866.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 195aa MW: 21704.3 Da PI: 4.5489 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.7 | 1.3e-17 | 26 | 74 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+Wv+eIr p++ + r++lg+f t+e+Aa+a++ a ++++g XP_022997866.1 26 YRGVRKRS-WGKWVSEIRQPRK---KSRIWLGTFTTPEMAARAHDVALLSIKG 74 9****888.**********843...6*********************998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MAEASNSNLE SESTEIKRGN RKHQIYRGVR KRSWGKWVSE IRQPRKKSRI WLGTFTTPEM 60 AARAHDVALL SIKGDSAKPI LNFPQLAGLL PRPVSLMPRD IQAAAAKAAA MVDFDSTMPT 120 TSSSNDEEGS DELGEIVELP NIEEEISAES WNKFELVDSV DWWGNPPYTV AETDFVGGFS 180 YQSTIPVIFD GGDWE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25810.1 | 9e-47 | ERF family protein |