PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997860.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 473aa MW: 53150.5 Da PI: 8.2535

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997860.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127	7.6e-40	172	248	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC++d+s++k+y+r+h+vCe hsk+p+v++ g e+rfCqqCsrfh++sefD +krsCrrrL++hn+rrrk+q+ XP_022997860.1 172 CQVEGCNMDISNVKDYYRKHRVCESHSKSPKVIIGGFERRFCQQCSRFHSISEFDGKKRSCRRRLSNHNARRRKPQS 248 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MEWNARPPLQ WDWDNLTVLN PSYSEHSDVL HPTFFQTKHG INSGPSNSAG DDRTTGGPFF 60 KLGQTSPKIS KSVSTNSSFF EKSRTTKFTL EGFEPTLEDS CNKKEFVEAE VVSTYGTPET 120 STCSCEPMLS LKLGKQAYFE NASAVNLTKP SALMVESRAT RKRCQNTPSA HCQVEGCNMD 180 ISNVKDYYRK HRVCESHSKS PKVIIGGFER RFCQQCSRFH SISEFDGKKR SCRRRLSNHN 240 ARRRKPQSKV VGLNPARLSS WDFENRQIDI FSDKLSLIYP TPNEKSAWES AFSSRHPQCG 300 KYVSKPEPTY GSIGQLNVSE DEMCYVHAMP YHDNTSKAVP FKGAATKILD PEGYVIPSNL 360 NSAQDLQRAL SLLSTDTKGP YEARLFAPDN PNRLVNPNYA NQPSISQSPM NLGIQTLPFA 420 SVDSQSWGNG HHHPIELQMQ IHHPNIEGGN NLFQDFQLFK TPCEIGMFSN QIS

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MEWNARPPLQ WDWDNLTVLN PSYSEHSDVL HPTFFQTKHG INSGPSNSAG DDRTTGGPFF  60
KLGQTSPKIS KSVSTNSSFF EKSRTTKFTL EGFEPTLEDS CNKKEFVEAE VVSTYGTPET  120
STCSCEPMLS LKLGKQAYFE NASAVNLTKP SALMVESRAT RKRCQNTPSA HCQVEGCNMD  180
ISNVKDYYRK HRVCESHSKS PKVIIGGFER RFCQQCSRFH SISEFDGKKR SCRRRLSNHN  240
ARRRKPQSKV VGLNPARLSS WDFENRQIDI FSDKLSLIYP TPNEKSAWES AFSSRHPQCG  300
KYVSKPEPTY GSIGQLNVSE DEMCYVHAMP YHDNTSKAVP FKGAATKILD PEGYVIPSNL  360
NSAQDLQRAL SLLSTDTKGP YEARLFAPDN PNRLVNPNYA NQPSISQSPM NLGIQTLPFA  420
SVDSQSWGNG HHHPIELQMQ IHHPNIEGGN NLFQDFQLFK TPCEIGMFSN QIS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	245	KKRSCRRRLSNHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-47	SBP family protein