PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997787.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 518aa MW: 54373.1 Da PI: 7.3744

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127	2e-39	127	263	5	110
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ + s +ss+s+ s++ XP_022997787.1 127 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSsLNISIRSSGSTLSAPpsksaphsfh 221 89****************************************************************88865555555555444445555567777 PP TCP 89 ......................kaaksaakskksqksaasalnl 110 +++++++q++++++lnl XP_022997787.1 222 galalahhpnayeegfahaallGF--HHHHHHQQQQQHHHQLNL 263 766666666666666665543311..111222233333333444 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MELTDMQQSN KQQQQHHHHH SNPNQKQPQP QQQHHVVPFD GRSAAAGGGP PFMGSISTLV 60 SLPPPSSSAS NSSSSSSSSS SSAVVPPPHL LDASLVIAXR SDTTTNPSPR SASASASAST 120 SNANALKRST KDRHTKVDGR GRRIRMPATC AARVFQLTRE LGHKSDGETI EWLLQQAEPA 180 IIAATGTGTI PANFSSLNIS IRSSGSTLSA PPSKSAPHSF HGALALAHHP NAYEEGFAHA 240 ALLGFHHHHH HQQQQQHHHQ LNLMTADQIA DALPGGESGG GGGGGGDSTD NYMRKRYRED 300 LFKEDTQSPG ESSGGAGSPK AIKSDLQLEK QQSQQQSASS SLLRPATAMW AVAPSSGASN 360 TFWMLPVTTG SGGANVGSSG ASGGPMEAQM WPFSTSANTL QAPLHFMPRF NIPGGVEIQA 420 AGAAAGGGGR AGQLQLGSML MHQQQQQQQQ QQQQHQQLGL GVSESNLGVL AALNAAYSRG 480 GFNANSDHHH NHHPLEHHSN APQPHATDSG DEDPNTSQ

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MELTDMQQSN KQQQQHHHHH SNPNQKQPQP QQQHHVVPFD GRSAAAGGGP PFMGSISTLV  60
SLPPPSSSAS NSSSSSSSSS SSAVVPPPHL LDASLVIAXR SDTTTNPSPR SASASASAST  120
SNANALKRST KDRHTKVDGR GRRIRMPATC AARVFQLTRE LGHKSDGETI EWLLQQAEPA  180
IIAATGTGTI PANFSSLNIS IRSSGSTLSA PPSKSAPHSF HGALALAHHP NAYEEGFAHA  240
ALLGFHHHHH HQQQQQHHHQ LNLMTADQIA DALPGGESGG GGGGGGDSTD NYMRKRYRED  300
LFKEDTQSPG ESSGGAGSPK AIKSDLQLEK QQSQQQSASS SLLRPATAMW AVAPSSGASN  360
TFWMLPVTTG SGGANVGSSG ASGGPMEAQM WPFSTSANTL QAPLHFMPRF NIPGGVEIQA  420
AGAAAGGGGR AGQLQLGSML MHQQQQQQQQ QQQQHQQLGL GVSESNLGVL AALNAAYSRG  480
GFNANSDHHH NHHPLEHHSN APQPHATDSG DEDPNTSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	7e-54	TCP family protein