PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996950.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 327aa MW: 37112.7 Da PI: 8.2089

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996950.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.7	8.7e-16	14	63	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W + ++++ ++R++k+c++rw++yl XP_022996950.1 14 KGPWSPEEDAKLKSYIEKHGTGgNWIALPQKIVgLKRCGKSCRLRWLNYL 63 79**********************************************97 PP
2	Myb_DNA-binding	36.9	8.3e-12	70	112	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022996950.1 70 GGFSEEEDRIICSLYVSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 112 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE KHGTGGNWIA LPQKIVGLKR CGKSCRLRWL 60 NYLRPNIKHG GFSEEEDRII CSLYVSIGSR WSIIAAQLPG RTDNDIKNYW NTRLKKKLFG 120 KQRKEHHHQQ QATRRGNALK QMQQMKRPSE TNNNTTNYGA ENNNIAIFSL NEAHNNIPYW 180 PQQQQLPLAP HYNQGSLPAS DPINPIENLS KFGGQSMGEE SGYSNMNNNA NGYGHFLPIM 240 QGQSSNQMVE VEVENYNMTG YEDPRRVLCG LEFLFEDHHQ ILGTNGHGCE MGSLQSSSCP 300 NYEPIMLQDL PTTAEQYNAK FDDLRIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-82	MYB family protein