PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022996783.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | SRS | ||||||||
Protein Properties | Length: 337aa MW: 36312.1 Da PI: 6.8477 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 227.1 | 3.2e-70 | 104 | 260 | 3 | 153 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..aeaaskrkrel......kskkqsalsst 89 g+++CqdCGnqakkdCa+ RCRtCCksrgf+C+thvkstWvpaakrrerqqq aa+++++++++ ++skr+re+ +++++sa+++ XP_022996783.1 104 GGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQQQQQQEQfrGGENSKRQRETqitttvSAATASATACP 198 5789*****************************************************99999988665566666666533433333334444444 PP DUF702 90 klssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 +l+s + + le +++P+ev+s+avfrcv+vs++dd++ee+aYqtav+igGhvfkGiLydqG+e XP_022996783.1 199 RLPSIT--SGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPE 260 444443..3466777***********************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence |
MAGFFYLGGG REGPPNKQEE EEEREQNLFM YRNEEIYNKG FEIWPQQYTN HHQNPSLTDH 60 LSFGVGPSRR SFMINDSDEP SRSAFTVMRP AAAFAASAAA AAAGGGMNCQ DCGNQAKKDC 120 AYLRCRTCCK SRGFQCQTHV KSTWVPAAKR RERQQQIAAL QQQQQQEQFR GGENSKRQRE 180 TQITTTVSAA TASATACPRL PSITSGLELA QFPSEVNSPA VFRCVKVSAM DDADEEFAYQ 240 TAVNIGGHVF KGILYDQGPE VRYTAAGESS SGHGGDGSTH PLNLIAGSSN AGPTSASTSA 300 ATSTNPSAAA PLLDPTIYPA PLNAFMAGTQ FFPPSRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75520.1 | 1e-72 | SRS family protein |