PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996289.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 279aa    MW: 30520.2 Da    PI: 7.5079
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996289.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.92.4e-182166147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W+++Ed  l+++v+++G+++W++I+  ++ gR++k+c++rw + 
   XP_022996289.1 21 KGSWSPQEDATLIKLVEEHGPRNWSLISTGIP-GRSGKSCRLRWCNQ 66
                     799*****************************.***********985 PP
2Myb_DNA-binding56.46.7e-1875117347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+ Ed l+v+a++ +G++ W+tIar ++ gRt++ +k++w++ 
   XP_022996289.1  75 PFTPAEDSLIVQAHAVHGNK-WSTIARLLP-GRTDNAIKNHWNST 117
                      89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MVLIGIPLSN RSSNSNSVRI KGSWSPQEDA TLIKLVEEHG PRNWSLISTG IPGRSGKSCR  60
LRWCNQLSPA VQHRPFTPAE DSLIVQAHAV HGNKWSTIAR LLPGRTDNAI KNHWNSTLKR  120
RRDADFSSDS TAFMKRPSCE VLRSASDDDD SEGSFKRRCF GMAVERNGGG EGEGEGPETS  180
LRLSLPGEVV VPAACVKVKE EVTVDSEEND GRRHVAVAAT AEEKGNRKRE MDESCMATIM  240
QRMIAREVRN YIDSLRAHGG LSIGPNIGSG LDSGVQDTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.13e-53MYB family protein