PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022995698.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 192aa    MW: 20871.8 Da    PI: 8.5832
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022995698.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260124.45.8e-39191191100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkCa+dC++apyf+++q +++fa++hk+FGasnv+kll ++p  +r +a+ +++yeA+ar+rdPvyG+v+++++lqqq++ l+++l
  XP_022995698.1  19 PCGACKFLRRKCAPDCIFAPYFCSDQsAARFAAIHKVFGASNVSKLLLHVPVPHRCEAVVTIAYEAQARIRDPVYGCVAHLFALQQQVAYLQTQL 113
                     7***********************9978******************************************************************* PP

          DUF260  95 allkee 100
                      +++++
  XP_022995698.1 114 MQARAQ 119
                     999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MASSTTANSH ASASASASPC GACKFLRRKC APDCIFAPYF CSDQSAARFA AIHKVFGASN  60
VSKLLLHVPV PHRCEAVVTI AYEAQARIRD PVYGCVAHLF ALQQQVAYLQ TQLMQARAQL  120
AQTHMQIQWT GIPKFPNYQS QVTNSAVSPQ TSLESAANND EAQFQQFPTK IPASCHGDVG  180
ELQALALRMM RN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.13e-67LBD family protein