PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022995611.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 742aa MW: 81501.7 Da PI: 5.217

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022995611.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	99.9	2.1e-31	103	187	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m++++r++ lk+plW+evs+k+ e g++rs+k+Ckek+en++k+yk++keg+++r ++ +t+++f+qlea XP_022995611.1 103 RWPRQETLALLRIRSDMDSAFRDATLKGPLWDEVSRKLTELGYNRSAKKCKEKFENVQKYYKRTKEGRGGR--QDGKTYKFFTQLEA 187 8******************************************************************98..56667*****85 PP
2	trihelix	103.1	2.1e-32	498	583	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k evlaLi++r +e+r++++ k+ lWee+s+ m++ g++rs+k+Ckekwen+nk++kk+ke++kkr e+s+tcpyf++l+a XP_022995611.1 498 RWPKPEVLALIKLRGGLETRYQETGPKGLLWEEISAGMQRMGYKRSAKRCKEKWENINKYFKKVKESNKKR-RENSKTCPYFNELDA 583 8*******************************************************************8.78889*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
MEPAAEPGSG SGSGLELPPS QSQFTVSPPD ITTPSLTVDA ITDSQQVEAA SPISSRPPAS 60 SSLNYEELFR LSTTVQMPVV GDDEALAGDD ADRTTGSSGA GNRWPRQETL ALLRIRSDMD 120 SAFRDATLKG PLWDEVSRKL TELGYNRSAK KCKEKFENVQ KYYKRTKEGR GGRQDGKTYK 180 FFTQLEALHN ASASASAAAS TPNVAVSCFS APPIGFGISN PTPISSVKIS STAISSQTPM 240 GIYSPADHFT VRPPPATAPM GVSFSSNTSS ASTEEDDNDE EEMGFDVDLE GEPSSVAGTS 300 RKRRRGVVKG SGSRTHKMMM EFFEGLMKEV MHKQEVMQQK FLEAMGKREQ DRMIREETWK 360 RQEMARLSRE QERMAQERTI SASRDAAIIA FLQKFTGQTI QLPVVNIPSS VAPHHQHQQH 420 DVPVPTPVPV PVSVPVPLSP VPPPPLQPQT ALSLQQNQKT AQDQNPPPSN TLSPLDQPMP 480 YQEISQGGDG SAEPFSSRWP KPEVLALIKL RGGLETRYQE TGPKGLLWEE ISAGMQRMGY 540 KRSAKRCKEK WENINKYFKK VKESNKKRRE NSKTCPYFNE LDALYRKKIL GSGGGGSDGG 600 GSGSRSSFSD TSKTEQDPIK NMDTEIAPST ATETSQTILT EGLSASLFGE GTEEQPATST 660 KPEDIVNELM ELHELCRPDS NNEEEYCSED EDDTPDNDDK DKDKNKNTKN TKKMDYKIEF 720 ERRNAGSSNG VGNEFQSMAV VQ

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

MEPAAEPGSG SGSGLELPPS QSQFTVSPPD ITTPSLTVDA ITDSQQVEAA SPISSRPPAS  60
SSLNYEELFR LSTTVQMPVV GDDEALAGDD ADRTTGSSGA GNRWPRQETL ALLRIRSDMD  120
SAFRDATLKG PLWDEVSRKL TELGYNRSAK KCKEKFENVQ KYYKRTKEGR GGRQDGKTYK  180
FFTQLEALHN ASASASAAAS TPNVAVSCFS APPIGFGISN PTPISSVKIS STAISSQTPM  240
GIYSPADHFT VRPPPATAPM GVSFSSNTSS ASTEEDDNDE EEMGFDVDLE GEPSSVAGTS  300
RKRRRGVVKG SGSRTHKMMM EFFEGLMKEV MHKQEVMQQK FLEAMGKREQ DRMIREETWK  360
RQEMARLSRE QERMAQERTI SASRDAAIIA FLQKFTGQTI QLPVVNIPSS VAPHHQHQQH  420
DVPVPTPVPV PVSVPVPLSP VPPPPLQPQT ALSLQQNQKT AQDQNPPPSN TLSPLDQPMP  480
YQEISQGGDG SAEPFSSRWP KPEVLALIKL RGGLETRYQE TGPKGLLWEE ISAGMQRMGY  540
KRSAKRCKEK WENINKYFKK VKESNKKRRE NSKTCPYFNE LDALYRKKIL GSGGGGSDGG  600
GSGSRSSFSD TSKTEQDPIK NMDTEIAPST ATETSQTILT EGLSASLFGE GTEEQPATST  660
KPEDIVNELM ELHELCRPDS NNEEEYCSED EDDTPDNDDK DKDKNKNTKN TKKMDYKIEF  720
ERRNAGSSNG VGNEFQSMAV VQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	301	305	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	4e-62	Trihelix family protein