PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022995089.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Trihelix | ||||||||
Protein Properties | Length: 436aa MW: 49607.7 Da PI: 6.5888 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 69.8 | 5e-22 | 120 | 214 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt++ v++Li+++ ++++ ++g +kk++W+ vsk m ++g+++sp+qC++k+++lnkryk+++++ +++ +++++++ ++ d++ XP_022995089.1 120 KWTDDIVRLLIAVVACVGDDGEAGMgskrksgilQKKGKWKMVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGtSCRVVENPALMDSM 214 7**************8888888763445667888**********************************************669999999888887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 436 aa Download sequence |
MDSSGLGGGF LSGNGGLLDL ESPIRRHQQT QLINTSLTHR HHLKMMNTLE GDHQSVGIMD 60 TKRMGHKDLS MTFTKGKAIA SGGVTNNSNT SEEDEPSFTE DGECTEFLKG KKGSPWQRMK 120 WTDDIVRLLI AVVACVGDDG EAGMGSKRKS GILQKKGKWK MVSKIMISKG CHVSPQQCED 180 KFNDLNKRYK RLNDILGRGT SCRVVENPAL MDSMPHLSSK VKDDVRKILS SKHLFYKEMC 240 AYHNGQTIPG CQDVDFQGKI LPVVNFSEGN NESEEADDSD SDSDESDNED DHYPEENRLW 300 PAQSRGRDKA SADDGPLWSN TSAQNELEGQ IDVFLSDPTK PQWERRDWIK KQMLQLQEQC 360 VSFQAQSFEL EKQRFKWLRY CSKKSRDLER MRLENERMKI DNERRVLQLK QKEMELEFKR 420 SDSSFGPTLG IDRIQG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 8e-70 | Trihelix family protein |