PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022994531.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 231aa    MW: 26841.8 Da    PI: 10.2675
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022994531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.98.2e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+
  XP_022994531.1  9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59
                    79***********************************************96 PP
2K-box104.51.4e-34801746100
           K-box   6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                       +++++ + +++ e+akLk+++e Lq+++Rh++GedL+sL+lkeLq+ eqqL+++lk+iR++Kn+l++e+i+elqkk k+lqe+n++L kk++e
  XP_022994531.1  80 LIANDNQSNGNWSLEHAKLKARVEVLQKNHRHFMGEDLDSLTLKELQNTEQQLDSALKQIRARKNQLMHESISELQKKDKALQEQNNMLAKKIKE 174
                     5557788899**********************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFEYSTD  60
SCMEKILERY ERYSYAERRL IANDNQSNGN WSLEHAKLKA RVEVLQKNHR HFMGEDLDSL  120
TLKELQNTEQ QLDSALKQIR ARKNQLMHES ISELQKKDKA LQEQNNMLAK KIKEKEKAQA  180
QNPPSEQEQQ YSHGVSPLLL PQPFPSLAMT TTLLPLPIPQ HERQRRGCQL R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.12e-87MIKC_MADS family protein