PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994088.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 683aa MW: 78662.7 Da PI: 7.4182

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.5	7e-21	63	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+Ak++GFs+r+++++ + + t+r fvC + g++ ++ +++k +r+r+++r+gC+a ++++k+ ++w+vt + ++HnHel XP_022994088.1 63 EFYSEFAKRCGFSIRRHRTEGKdGIGKGLTRRYFVCHRAGNTPIKTPSENKPQRNRKSSRCGCQAYMRISKTMelgPAEWRVTGFANHHNHELL 156 6************999887735667799*********9999999****************99878789************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MMSEETGPLL VAYDDPSDQQ SPSLEEPGST DESPDETRMS QDLSNDATPY IGQRFPTHDS 60 AYEFYSEFAK RCGFSIRRHR TEGKDGIGKG LTRRYFVCHR AGNTPIKTPS ENKPQRNRKS 120 SRCGCQAYMR ISKTMELGPA EWRVTGFANH HNHELLEPNQ VRFLPAYRTI SEMDKARIVM 180 YAKSGISVQQ MMRLMELEKG LEPGYLPFTE KDVRNLLQSF RKLEHEEESI DLLRMCQNIK 240 EKDPNFIFEF MIDSNNRLEN IAWSYASSIQ AYEIFGDAVV FDTTHRLTAF DMPLGIWVGI 300 NNYGMPCLLS CVLLREKNLR SFTWALKAFM GFMNGKAPQT ILTDQNLCLK DAIAMELPTT 360 KHALCIWMIV AKFPSWFNAV LGERYNEWKR EFYRLYNLES IEDFEIGWRD MVYSFGLHTN 420 SPIANLYSTR FLWALPFLRS HFFAGMETID QSKTINAFIQ RFLSAQTHPR QFIEQVADAV 480 DFKDQQTMQQ NLQNISLKTG APMESHAATI LTPFTFSKLQ EQLVLAAHYA SFQMDDGFLV 540 RHHTKADGGR KVYWVHPEGI ISCSCRQFEF SGILCRHALR VLSTVNCFQI PESYLPVRWR 600 RISMPSAKLL QSTTNDHGER TQLLQSMVTT LVTESAKSRE RLDFATKQVS VLLSRVREHS 660 TSLPDSRDVS SRRVEGNIVF CIE

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MMSEETGPLL VAYDDPSDQQ SPSLEEPGST DESPDETRMS QDLSNDATPY IGQRFPTHDS  60
AYEFYSEFAK RCGFSIRRHR TEGKDGIGKG LTRRYFVCHR AGNTPIKTPS ENKPQRNRKS  120
SRCGCQAYMR ISKTMELGPA EWRVTGFANH HNHELLEPNQ VRFLPAYRTI SEMDKARIVM  180
YAKSGISVQQ MMRLMELEKG LEPGYLPFTE KDVRNLLQSF RKLEHEEESI DLLRMCQNIK  240
EKDPNFIFEF MIDSNNRLEN IAWSYASSIQ AYEIFGDAVV FDTTHRLTAF DMPLGIWVGI  300
NNYGMPCLLS CVLLREKNLR SFTWALKAFM GFMNGKAPQT ILTDQNLCLK DAIAMELPTT  360
KHALCIWMIV AKFPSWFNAV LGERYNEWKR EFYRLYNLES IEDFEIGWRD MVYSFGLHTN  420
SPIANLYSTR FLWALPFLRS HFFAGMETID QSKTINAFIQ RFLSAQTHPR QFIEQVADAV  480
DFKDQQTMQQ NLQNISLKTG APMESHAATI LTPFTFSKLQ EQLVLAAHYA SFQMDDGFLV  540
RHHTKADGGR KVYWVHPEGI ISCSCRQFEF SGILCRHALR VLSTVNCFQI PESYLPVRWR  600
RISMPSAKLL QSTTNDHGER TQLLQSMVTT LVTESAKSRE RLDFATKQVS VLLSRVREHS  660
TSLPDSRDVS SRRVEGNIVF CIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein