PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022993911.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 281aa MW: 32966.9 Da PI: 10.3003 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.5 | 1.3e-17 | 22 | 67 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed++l ++v+q+G +W++Ia++++ gR++k+c++rw++ XP_022993911.1 22 RGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQ-GRSGKSCRLRWFNQ 67 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 60.3 | 4e-19 | 74 | 117 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++++eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ XP_022993911.1 74 RKPFSEEEEERLLAAHRIHGNK-WSLIARLFP-GRTDNAVKNHWHV 117 789*******************.*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 281 aa Download sequence |
MIMKDSGDVH VYDHEYKSSC PRGHWRPAED QKLRRLVEQY GAQNWNSIAE KLQGRSGKSC 60 RLRWFNQLDP RIIRKPFSEE EEERLLAAHR IHGNKWSLIA RLFPGRTDNA VKNHWHVIMA 120 RKQREQSKLP KRTHQHFPVT SSNFLGNQTE SSSRDHRQFS TTILVSDNNS FHKDGMVWNL 180 RQSLKGYSDH NNIPILHRHY ANFRTSPSSP RFCFPTAKIP FRVFEFGSTS TTTLVKFMAN 240 TDNHHHRHHH LHAQEQRQEQ ESLNDDKDTP FIDFLGVGIS S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G17950.1 | 8e-64 | MYB family protein |