PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022993827.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 262aa MW: 29907.1 Da PI: 5.3686 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.1 | 1.8e-17 | 11 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++ +G g+W+ a++ g+ Rt+k+c++rw++yl XP_022993827.1 11 RGPWTIEEDTLLIHYIASHGEGHWNNLAKHAGLERTGKSCRLRWLNYL 58 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.6 | 9.1e-16 | 64 | 107 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++l+ +++ ++G++ W++Ia+ ++ gRt++++k++w++ XP_022993827.1 64 RGNLTPQEQLLIFQLHSKWGNR-WSKIAQQLP-GRTDNEIKNYWRT 107 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MEGVGRSELR RGPWTIEEDT LLIHYIASHG EGHWNNLAKH AGLERTGKSC RLRWLNYLKP 60 DIKRGNLTPQ EQLLIFQLHS KWGNRWSKIA QQLPGRTDNE IKNYWRTRVQ KQAKQLNIQS 120 NSKKFLETVR HLWIPRLLQE MDQRSSSTSF NYNSPSSESF SQALQQNPSG SSAIEANQSS 180 IQSSGAYYQW PESSESVSEE FGNNSDLQPL DNGELQVDQQ QHPFSLLGAA CGVAEFDGQM 240 DASDWVLEDD VAETLWNLEN CL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 6e-80 | MYB family protein |