PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022993744.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 440aa MW: 49078.3 Da PI: 7.6156

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022993744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.9	7.5e-16	50	94	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rW +eE++++++a k++G + W+ I +++g ++t+ q++s+ qk+ XP_022993744.1 50 RERWKEEEHDKFIEALKLYGRD-WRQIEEHVG-TKTAVQIRSHAQKF 94 78****************77.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MNTGGGLCSN NMNSAVYEST VTPDQHSSAN VQLKEFAPKA RKPYTITKQR ERWKEEEHDK 60 FIEALKLYGR DWRQIEEHVG TKTAVQIRSH AQKFFSKVTR NSNGCSTNLV GCIEIPPPRP 120 KRKPAHPYPR KEVAHSHKLS SISEQTRSLS PQLSEKECQS PTSTVIAATS GSDTLMFANS 180 RIHHDSASPD SSVPSSLDNE SPTAAAPVPE NSTLHEKTSK NLELFTKDDM HEKDDSTKEP 240 SLQSLKLFGR TVLISDPHKQ TPIIETCSSK ADSKPGENQK QISPRKSPTG NPESTWNHGA 300 FYFIQLNSVD SNQGAGSTVP VSWWSSYGSY PISFVHCFNQ AHSNPSREVD DREAHKDQSW 360 CGSNTGSLNS GENDIQSSSS RVFQNRDEMI GKALSCELIS SHEKNTEGFV PYKRCMTERA 420 TQSHTITDTE REEKRIRLCL

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MNTGGGLCSN NMNSAVYEST VTPDQHSSAN VQLKEFAPKA RKPYTITKQR ERWKEEEHDK  60
FIEALKLYGR DWRQIEEHVG TKTAVQIRSH AQKFFSKVTR NSNGCSTNLV GCIEIPPPRP  120
KRKPAHPYPR KEVAHSHKLS SISEQTRSLS PQLSEKECQS PTSTVIAATS GSDTLMFANS  180
RIHHDSASPD SSVPSSLDNE SPTAAAPVPE NSTLHEKTSK NLELFTKDDM HEKDDSTKEP  240
SLQSLKLFGR TVLISDPHKQ TPIIETCSSK ADSKPGENQK QISPRKSPTG NPESTWNHGA  300
FYFIQLNSVD SNQGAGSTVP VSWWSSYGSY PISFVHCFNQ AHSNPSREVD DREAHKDQSW  360
CGSNTGSLNS GENDIQSSSS RVFQNRDEMI GKALSCELIS SHEKNTEGFV PYKRCMTERA  420
TQSHTITDTE REEKRIRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	2e-46	MYB_related family protein