PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022993293.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 230aa MW: 25693.3 Da PI: 10.6243 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.6 | 2.5e-19 | 71 | 125 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q + Le+ F+ n+ ++ +++e LA+ l+L+ rqV vWFqNrRa+ k XP_022993293.1 71 RKKLSLSKHQSRLLEDIFRHNHSLNPKQKEALAMALQLKPRQVEVWFQNRRARSK 125 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 109.7 | 2.1e-35 | 71 | 160 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+ lsk+q++lLE+ F++++ L+p++K++la +L+l+prqv+vWFqnrRAR k+kq+E++y++L+r++ +l+e+n+rL++e eeLr ++ XP_022993293.1 71 RKKLSLSKHQSRLLEDIFRHNHSLNPKQKEALAMALQLKPRQVEVWFQNRRARSKLKQTEMEYQYLRRWFGSLTEQNRRLRRELEELR-AI 160 699************************************************************************************9.44 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MAFLPINSSS LDLSISMPGF ASSPPRPSAK ELDMNRVPVV GEAAEEERAV AERTEEEEES 60 CSINNGGGQP RKKLSLSKHQ SRLLEDIFRH NHSLNPKQKE ALAMALQLKP RQVEVWFQNR 120 RARSKLKQTE MEYQYLRRWF GSLTEQNRRL RRELEELRAI KVALPAVDSS HGRQPPLPVS 180 TITMCPQCKR VTAATITSSR AAATQTAIAT TATPPKAVRS ALKLQQPSQG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 128 | RRARSKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 6e-55 | HD-ZIP family protein |