PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992960.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 529aa MW: 59357.6 Da PI: 4.9551

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992960.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.2	1.2e-51	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdee+v +yL++kv+gk++++ + i+ ++iyk+ePwdLp k k+k+++ ewyfFs+ dkky +++r+nrat++gyWk+tgkd++v XP_022992960.1 9 LAPGFRFHPTDEEIVGYYLRRKVSGKPIRF-DPISVTEIYKLEPWDLPgKsKLKSRDLEWYFFSPLDKKYGNSSRTNRATEKGYWKTTGKDRPVR 102 579************************9.89***********6347777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_022992960.1 103 H-NSRVVGMKKTLVYHSGRAPRGARSNWVMHEYRL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MGRDSTTSLA PGFRFHPTDE EIVGYYLRRK VSGKPIRFDP ISVTEIYKLE PWDLPGKSKL 60 KSRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR 120 APRGARSNWV MHEYRLTDEG LEKAGVVQDA FVLCRVFQKS GPGPKNGEQY GAPFIEEEWE 180 EDEELTLPGE EIVANKGSVD VSGEEIAQYF DGELPCECTQ LPSNCPQDAS NHVMLPNVLV 240 EKDNKPETCA SKTVELQQSH RFFQPEQYQM GANSEKDEDI DYLLDEPYPS VPDDLALNEE 300 LFLEANDLSN PAESDPTGFD LLKEYLTFFD ADDNLHLAFE PSDILGGEEP ISGQAIPEEV 360 EKEFMATKQA SVASINDAST SKPNPEAIKT DSKSPFLKRA SYMLGNIPAP PAFASEYPSK 420 DMVIRLNSSA QTSSPAHVTA QMIRVRNSTP SGKLLSSLYG KNADVDLILS FARHRHQGES 480 DDIVTKLPIF GAQSRKNRNM GSRGFLFFLL FWVLILSVSF KVGSYIYTH

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MGRDSTTSLA PGFRFHPTDE EIVGYYLRRK VSGKPIRFDP ISVTEIYKLE PWDLPGKSKL  60
KSRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR  120
APRGARSNWV MHEYRLTDEG LEKAGVVQDA FVLCRVFQKS GPGPKNGEQY GAPFIEEEWE  180
EDEELTLPGE EIVANKGSVD VSGEEIAQYF DGELPCECTQ LPSNCPQDAS NHVMLPNVLV  240
EKDNKPETCA SKTVELQQSH RFFQPEQYQM GANSEKDEDI DYLLDEPYPS VPDDLALNEE  300
LFLEANDLSN PAESDPTGFD LLKEYLTFFD ADDNLHLAFE PSDILGGEEP ISGQAIPEEV  360
EKEFMATKQA SVASINDAST SKPNPEAIKT DSKSPFLKRA SYMLGNIPAP PAFASEYPSK  420
DMVIRLNSSA QTSSPAHVTA QMIRVRNSTP SGKLLSSLYG KNADVDLILS FARHRHQGES  480
DDIVTKLPIF GAQSRKNRNM GSRGFLFFLL FWVLILSVSF KVGSYIYTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-100	NAC family protein