PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992959.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 530aa MW: 59485.7 Da PI: 4.9551

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.2	1.2e-51	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdee+v +yL++kv+gk++++ + i+ ++iyk+ePwdLp k k+k+++ ewyfFs+ dkky +++r+nrat++gyWk+tgkd++v XP_022992959.1 9 LAPGFRFHPTDEEIVGYYLRRKVSGKPIRF-DPISVTEIYKLEPWDLPgKsKLKSRDLEWYFFSPLDKKYGNSSRTNRATEKGYWKTTGKDRPVR 102 579************************9.89***********6347777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_022992959.1 103 H-NSRVVGMKKTLVYHSGRAPRGARSNWVMHEYRL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MGRDSTTSLA PGFRFHPTDE EIVGYYLRRK VSGKPIRFDP ISVTEIYKLE PWDLPGKSKL 60 KSRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR 120 APRGARSNWV MHEYRLTDEG LEKAGVVQDA FVLCRVFQKS GPGPKNGEQY GAPFIEEEWE 180 EDEELTLPGE EIVANKGSVD VSGEEIAQQY FDGELPCECT QLPSNCPQDA SNHVMLPNVL 240 VEKDNKPETC ASKTVELQQS HRFFQPEQYQ MGANSEKDED IDYLLDEPYP SVPDDLALNE 300 ELFLEANDLS NPAESDPTGF DLLKEYLTFF DADDNLHLAF EPSDILGGEE PISGQAIPEE 360 VEKEFMATKQ ASVASINDAS TSKPNPEAIK TDSKSPFLKR ASYMLGNIPA PPAFASEYPS 420 KDMVIRLNSS AQTSSPAHVT AQMIRVRNST PSGKLLSSLY GKNADVDLIL SFARHRHQGE 480 SDDIVTKLPI FGAQSRKNRN MGSRGFLFFL LFWVLILSVS FKVGSYIYTH

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MGRDSTTSLA PGFRFHPTDE EIVGYYLRRK VSGKPIRFDP ISVTEIYKLE PWDLPGKSKL  60
KSRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR  120
APRGARSNWV MHEYRLTDEG LEKAGVVQDA FVLCRVFQKS GPGPKNGEQY GAPFIEEEWE  180
EDEELTLPGE EIVANKGSVD VSGEEIAQQY FDGELPCECT QLPSNCPQDA SNHVMLPNVL  240
VEKDNKPETC ASKTVELQQS HRFFQPEQYQ MGANSEKDED IDYLLDEPYP SVPDDLALNE  300
ELFLEANDLS NPAESDPTGF DLLKEYLTFF DADDNLHLAF EPSDILGGEE PISGQAIPEE  360
VEKEFMATKQ ASVASINDAS TSKPNPEAIK TDSKSPFLKR ASYMLGNIPA PPAFASEYPS  420
KDMVIRLNSS AQTSSPAHVT AQMIRVRNST PSGKLLSSLY GKNADVDLIL SFARHRHQGE  480
SDDIVTKLPI FGAQSRKNRN MGSRGFLFFL LFWVLILSVS FKVGSYIYTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-100	NAC family protein