PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992905.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 401aa MW: 45630 Da PI: 6.9899

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	205	251	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ed llv++v ++G + W+ Ia++++ gR +kqc++rw+++l XP_022992905.1 205 KGQWTPQEDRLLVQLVDEYGIKKWSQIAKMLQ-GRVGKQCRERWHNHL 251 799***************************.***********97 PP
2	Myb_DNA-binding	53.9	4.2e-17	257	299	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd +l++a+k G++ W+ Iar+++ gRt++ +k++w+ XP_022992905.1 257 KDTWSEEEDRILIEAHKDIGNK-WAEIARRLP-GRTENTIKNHWN 299 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MEFDSNFKDD LPLLSSFFSD KAESKPPLDD DDDREFSGME LGCSPSSSKG LFQSLLDHHH 60 HNNNHFQYLH QYFPVVNRSD SIDNSNNSHY DLDHHRRRLD GSLQSLLSEM PTQCFDPKFE 120 AFSNEAPKDQ SFESGAKFMH GFAGSGGVWT NFPGNFMPQF SQPPNSHLGL GLSDTIIGYD 180 HIKKRKRIQL RKENKPPKKL PNIIKGQWTP QEDRLLVQLV DEYGIKKWSQ IAKMLQGRVG 240 KQCRERWHNH LRPDIRKDTW SEEEDRILIE AHKDIGNKWA EIARRLPGRT ENTIKNHWNA 300 TKRRQNSKKL KGRDIDSNPN GSILQNYIKS VTAGDRKISD SLPLLVDSHS PAAEEGGGFC 360 FGFGYGSGSG SGSGMECLNL MQNEEMKSEM DLLELICQGN L

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MEFDSNFKDD LPLLSSFFSD KAESKPPLDD DDDREFSGME LGCSPSSSKG LFQSLLDHHH  60
HNNNHFQYLH QYFPVVNRSD SIDNSNNSHY DLDHHRRRLD GSLQSLLSEM PTQCFDPKFE  120
AFSNEAPKDQ SFESGAKFMH GFAGSGGVWT NFPGNFMPQF SQPPNSHLGL GLSDTIIGYD  180
HIKKRKRIQL RKENKPPKKL PNIIKGQWTP QEDRLLVQLV DEYGIKKWSQ IAKMLQGRVG  240
KQCRERWHNH LRPDIRKDTW SEEEDRILIE AHKDIGNKWA EIARRLPGRT ENTIKNHWNA  300
TKRRQNSKKL KGRDIDSNPN GSILQNYIKS VTAGDRKISD SLPLLVDSHS PAAEEGGGFC  360
FGFGYGSGSG SGSGMECLNL MQNEEMKSEM DLLELICQGN L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27785.1	1e-68	MYB family protein