PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991551.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 684aa MW: 75812.8 Da PI: 6.7783

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991551.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.5	3.8e-21	542	639	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++r+W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ +++ XP_022991551.1 542 QKVLKQSDVGNLGRIVLPKKEAETHlpELEARDGISIAMEDiGTSRVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvKCG 633 79***********************999999****7778*****777777777777.******************..566999 PP ..EEEE CS B3 91 elvvkv 96 +++++ XP_022991551.1 634 KYMIRG 639 888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 684 aa Download sequence
MDQTQMWVHD QNQQQHQNHQ IFLSDNDDDA LIFYSDFPPL PDFPCMSSSS SSTPAPVKPT 60 VSLSSSSSTS SSSSATSWAV LKSDADEIAE EIRINDNNSA SATTTAAAAA SAAVSSPSAV 120 KTEFNGGDCT DDMMMETFGY MDLLEDSNEF FDPTCIFQNE EQQQQQRDPL EDLRLESFEE 180 VEMEDLMMMH GGKSNDNGGK QNVAAAAAAA EEEDMAKVFL EWLRSNRETV SADDLRNVRI 240 KKATIESAAR RLGGGKEGMK QLLKLVLEWV QTNHLQKRKF KEINENEANL IGFQSPNSSG 300 HPWIQTPPPL PPPPLYSPPI LGYVQGGGGE AYGSGRGYSD HYQLLDSSLS WSNSNSNSNL 360 PGAVQLPRSH FNSFVDNFVA GPPLPPPQQQ GFAAGYGRGQ QYPYMGQYFQ AQGGDNGLVR 420 LDSSATKEAR KKRMARQRRF SAHHRHNHGG HHGNHHHHHS NSHQHQMNPN ASDHGNMATT 480 SQSNAGNWVY WPSSTDVVPA DSPVHAVNWS NSSLQNQPYP PRIQSERRQG WKPEKNLRFL 540 LQKVLKQSDV GNLGRIVLPK KEAETHLPEL EARDGISIAM EDIGTSRVWN MRYRYWPNNK 600 SRMYLLENTG DFVRANGLQE GDFIVIYSDV KCGKYMIRGV KVRQPGSKPD SKRGGKSQRS 660 HSTAGVNANG LSSSPPTPAT PRRH

Sequence ? help Back to Top

Protein Sequence Length: 684 aa Download sequence

MDQTQMWVHD QNQQQHQNHQ IFLSDNDDDA LIFYSDFPPL PDFPCMSSSS SSTPAPVKPT  60
VSLSSSSSTS SSSSATSWAV LKSDADEIAE EIRINDNNSA SATTTAAAAA SAAVSSPSAV  120
KTEFNGGDCT DDMMMETFGY MDLLEDSNEF FDPTCIFQNE EQQQQQRDPL EDLRLESFEE  180
VEMEDLMMMH GGKSNDNGGK QNVAAAAAAA EEEDMAKVFL EWLRSNRETV SADDLRNVRI  240
KKATIESAAR RLGGGKEGMK QLLKLVLEWV QTNHLQKRKF KEINENEANL IGFQSPNSSG  300
HPWIQTPPPL PPPPLYSPPI LGYVQGGGGE AYGSGRGYSD HYQLLDSSLS WSNSNSNSNL  360
PGAVQLPRSH FNSFVDNFVA GPPLPPPQQQ GFAAGYGRGQ QYPYMGQYFQ AQGGDNGLVR  420
LDSSATKEAR KKRMARQRRF SAHHRHNHGG HHGNHHHHHS NSHQHQMNPN ASDHGNMATT  480
SQSNAGNWVY WPSSTDVVPA DSPVHAVNWS NSSLQNQPYP PRIQSERRQG WKPEKNLRFL  540
LQKVLKQSDV GNLGRIVLPK KEAETHLPEL EARDGISIAM EDIGTSRVWN MRYRYWPNNK  600
SRMYLLENTG DFVRANGLQE GDFIVIYSDV KCGKYMIRGV KVRQPGSKPD SKRGGKSQRS  660
HSTAGVNANG LSSSPPTPAT PRRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	4e-92	B3 family protein