PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022991398.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 252aa    MW: 28396.1 Da    PI: 9.3837
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022991398.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.59.2e-52141381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelv +yL++kv++ +l++ ++i++v+++k++PwdLp +    e+e yfFs+r+ ky++g+r+nrat+sgyWkatg dk++l++
  XP_022991398.1  14 LPPGFRFHPTDEELVLQYLNRKVHSCPLPA-SIIPDVEVCKADPWDLPGN---MEQERYFFSTREAKYPNGNRSNRATASGYWKATGIDKQILTS 104
                     79****************************.89***************54...46799**********************************998 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++vg+kktLvfy+g+ p+g++tdW+mheyrl
  XP_022991398.1 105 nGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 138
                     56778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MEKLNFVKNG VLRLPPGFRF HPTDEELVLQ YLNRKVHSCP LPASIIPDVE VCKADPWDLP  60
GNMEQERYFF STREAKYPNG NRSNRATASG YWKATGIDKQ ILTSNGNQVV GMKKTLVFYR  120
GKPPHGSRTD WIMHEYRLAL PPTVCFNASQ EKTPFQRSGV GPMENWVLCR IFLKKRNGHP  180
SEEEKNRKAG LGKPVFYDFM RKERGGTDLN LAPSSSCSGS SGITEISNKE LDDHEESSSS  240
SSSSSRCNSK FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-102NAC family protein