PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991198.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 242aa MW: 28035.2 Da PI: 9.7868

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.9	1.3e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA ELS+LCdaev +i+fsstgkly+ys+ XP_022991198.1 10 RIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLIVFSSTGKLYDYST 59 8***********************************************96 PP
2	K-box	85.1	1.5e-28	78	171	8	99
K-box 8 s..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++ ++ + +++e+a Lk++++ Lq+ +R+l+Ge+L+ Ls+k+Lq+Le++Le slk +R K+++l+++i el++k + +++en +L kkl+ XP_022991198.1 78 QliNSVSELQFWKREAAALKQQLHYLQECHRQLMGEELSGLSVKDLQNLESKLEMSLKGVRVEKEKILRDEITELRQKGNHMHQENVELYKKLD 171 234678899**********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KARELSILCD AEVGLIVFSS TGKLYDYSTT 60 SIRSITDRYY KVKEEQNQLI NSVSELQFWK REAAALKQQL HYLQECHRQL MGEELSGLSV 120 KDLQNLESKL EMSLKGVRVE KEKILRDEIT ELRQKGNHMH QENVELYKKL DMIHKENAEL 180 QMKVYGPMEV DKTSRSSAQQ FTITNRYSMP ALQLRQPQPQ NSETSVPGIK LGYVLAIYVH 240 DI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	5e-89	MIKC_MADS family protein