PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022991177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 273aa MW: 30765.7 Da PI: 5.9519 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.3 | 2.8e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g+ R++k+c++rw +yl XP_022991177.1 14 KGPWTAEEDKKLINFLHTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 46.9 | 6.5e-15 | 71 | 111 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ E++ +d++ +G++ W++Ia++++ gRt++++k++w+++ XP_022991177.1 71 SEYEEKMVIDLHSHMGNR-WSKIASHLP-GRTDNEIKNHWNTH 111 6779**************.*********.************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 273 aa Download sequence |
MGRQPCCDKV GLKKGPWTAE EDKKLINFLH TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SEYEEKMVID LHSHMGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLKKMG 120 IDPQTHKPVS PLSDDAHLAH KNDQKSQQQQ FPSLPSPSRA LKEHDKETVI DETDVMDLLV 180 DGFCMEEDVS LIEPPQEVVV PCASSSSTIS TPSSSTPSSS SSFCSHSESA ANLLQDLVNE 240 FPEFEWPNIC ENGLVDELLE DDFGGWDFII NNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G66230.1 | 4e-89 | MYB family protein |