PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022991134.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 28035.2 Da PI: 9.7868 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.9 | 1.3e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA ELS+LCdaev +i+fsstgkly+ys+ XP_022991134.1 10 RIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLIVFSSTGKLYDYST 59 8***********************************************96 PP | |||||||
2 | K-box | 85.1 | 1.5e-28 | 78 | 171 | 8 | 99 |
K-box 8 s..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++ ++ + +++e+a Lk++++ Lq+ +R+l+Ge+L+ Ls+k+Lq+Le++Le slk +R K+++l+++i el++k + +++en +L kkl+ XP_022991134.1 78 QliNSVSELQFWKREAAALKQQLHYLQECHRQLMGEELSGLSVKDLQNLESKLEMSLKGVRVEKEKILRDEITELRQKGNHMHQENVELYKKLD 171 234678899**********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KARELSILCD AEVGLIVFSS TGKLYDYSTT 60 SIRSITDRYY KVKEEQNQLI NSVSELQFWK REAAALKQQL HYLQECHRQL MGEELSGLSV 120 KDLQNLESKL EMSLKGVRVE KEKILRDEIT ELRQKGNHMH QENVELYKKL DMIHKENAEL 180 QMKVYGPMEV DKTSRSSAQQ FTITNRYSMP ALQLRQPQPQ NSETSVPGIK LGYVLAIYVH 240 DI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 5e-89 | MIKC_MADS family protein |