PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991133.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 466aa MW: 51698.2 Da PI: 6.9988

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.7e-16	58	102	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rW +eE+e++++a +++G + W+ I +++g ++t+ q++s+ qk+ XP_022991133.1 58 RERWKEEEHEKFIEALTLYGRD-WRQIEEHVG-TKTAVQIRSHAQKF 102 78****************77.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MGAANMQSQN AGGGLCSDNT SSSLYESTAT ADQLKDPFSS GKEYCPKARK PYTITKQRER 60 WKEEEHEKFI EALTLYGRDW RQIEEHVGTK TAVQIRSHAQ KFFSKVMHNS NGCTATLGGC 120 IEIPPPRPKR KPAHPYPRKE VPGSHKLSSI SEQTRSLSPQ LSEKECQSPT STVVAAGGSY 180 ALNCANSRIH HERASPDSSI PSSEPNSSSL DNESPTVSPG KDNSTPQEKI SKNLELFPKD 240 VNEKDVSTKE VSIQSLKLFG RTVLITNPHK QTPTVETCAF EADGKQGENH KQISPWNSSK 300 VMRNTEGTWN HGAFYFIQLN SSDSNQDPGS TVPVSWWSSY GSYPLSFVQC FKQADSELNP 360 EVDDKETHKD QSCCGSNTGS VNSEENGDKY GENDIQCYKL FPNRDGDSVS KDELIGKALS 420 SELIISSHEK NTKGFVPYKR CMTERATKSH SITDAEREEK RIRLCL

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MGAANMQSQN AGGGLCSDNT SSSLYESTAT ADQLKDPFSS GKEYCPKARK PYTITKQRER  60
WKEEEHEKFI EALTLYGRDW RQIEEHVGTK TAVQIRSHAQ KFFSKVMHNS NGCTATLGGC  120
IEIPPPRPKR KPAHPYPRKE VPGSHKLSSI SEQTRSLSPQ LSEKECQSPT STVVAAGGSY  180
ALNCANSRIH HERASPDSSI PSSEPNSSSL DNESPTVSPG KDNSTPQEKI SKNLELFPKD  240
VNEKDVSTKE VSIQSLKLFG RTVLITNPHK QTPTVETCAF EADGKQGENH KQISPWNSSK  300
VMRNTEGTWN HGAFYFIQLN SSDSNQDPGS TVPVSWWSSY GSYPLSFVQC FKQADSELNP  360
EVDDKETHKD QSCCGSNTGS VNSEENGDKY GENDIQCYKL FPNRDGDSVS KDELIGKALS  420
SELIISSHEK NTKGFVPYKR CMTERATKSH SITDAEREEK RIRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	1e-40	MYB_related family protein