PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991104.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 434aa MW: 49156.2 Da PI: 6.895

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.4e-17	232	278	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ed llv++v ++G + W+ Ia+++ gR +kqc++rw+++l XP_022991104.1 232 KGQWTPQEDRLLVQLVDEYGVKKWSQIAKMLE-GRVGKQCRERWHNHL 278 799***************************.***********97 PP
2	Myb_DNA-binding	52.5	1.1e-16	284	326	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W+++Ed +l++a+k G++ W+ Iar+++ gRt++ +k++w+ XP_022991104.1 284 KDTWSEDEDRILIEAHKDIGNR-WAEIARRLP-GRTENTIKNHWN 326 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MEFDSNFKDD LPLLSSFFSD KPKSKRQLND DDNDDDTGEF SAMELATSPS SSKGLFHNLQ 60 LHSFDHDHHH DHNHNRHHQY LHHFPINGSD SINNNSSQHE LDRHQFSING SLQTLLSGMP 120 TQSFDPNFQP FGNEFSKDHT FENGAKFMHG LLGSRAVWTN FPGNFLPQFS QPPNSSSSST 180 HLGLGPATAG RWFLDEISYN TDNGYDQNKK KKRIQSRKEN RPPPTKLPNI VKGQWTPQED 240 RLLVQLVDEY GVKKWSQIAK MLEGRVGKQC RERWHNHLRP DIRKDTWSED EDRILIEAHK 300 DIGNRWAEIA RRLPGRTENT IKNHWNATKR RQNSKKLKGK YRDSNSNGSI LQNYINSVTA 360 GETKISDSMP QLVDSLSPAA VNGGGFYFEF GSGSGSGSGS GSGSGTEMEC LNLMQNDEMK 420 SEMDLLELIC QGNL

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MEFDSNFKDD LPLLSSFFSD KPKSKRQLND DDNDDDTGEF SAMELATSPS SSKGLFHNLQ  60
LHSFDHDHHH DHNHNRHHQY LHHFPINGSD SINNNSSQHE LDRHQFSING SLQTLLSGMP  120
TQSFDPNFQP FGNEFSKDHT FENGAKFMHG LLGSRAVWTN FPGNFLPQFS QPPNSSSSST  180
HLGLGPATAG RWFLDEISYN TDNGYDQNKK KKRIQSRKEN RPPPTKLPNI VKGQWTPQED  240
RLLVQLVDEY GVKKWSQIAK MLEGRVGKQC RERWHNHLRP DIRKDTWSED EDRILIEAHK  300
DIGNRWAEIA RRLPGRTENT IKNHWNATKR RQNSKKLKGK YRDSNSNGSI LQNYINSVTA  360
GETKISDSMP QLVDSLSPAA VNGGGFYFEF GSGSGSGSGS GSGSGTEMEC LNLMQNDEMK  420
SEMDLLELIC QGNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27785.1	6e-72	MYB family protein