PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022990511.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 211aa MW: 24183.1 Da PI: 6.1613 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.8 | 2.1e-17 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+++++ +G g W++ a+ g++Rt+k+c++rw++yl XP_022990511.1 17 KGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYL 64 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 70 | 113 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE+ l+ d++ ++G++ W++Iar ++ gRt++++k++w++ XP_022990511.1 70 RGNITPEEQVLIMDLHSKWGNR-WSKIARQLP-GRTDNEIKNYWRT 113 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MGTERLSSSQ DDNELRKGPW TMEEDLILIN YIANHGEGVW NSLAKAAGLK RTGKSCRLRW 60 LNYLRPGIRR GNITPEEQVL IMDLHSKWGN RWSKIARQLP GRTDNEIKNY WRTRIHKHMK 120 QQQEGDKVGE LMMSIASGLE TNDDGGISPC SQVSSIHNVT EPMEISHDYL PSSQGDIEAM 180 AYEHTTLPRE NGANNDNYWS MEDLWSMQLL N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27810.1 | 8e-76 | MYB family protein |