PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990303.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 543aa MW: 61177.9 Da PI: 4.2561

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.5	2.1e-52	8	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdee+v +yL++kv+gk+l + ++i+ vdiyk+ePwdLp+ k+++++ ewyfFs+ dkky++++r+nrat++gyWk+tgkd++v XP_022990303.1 8 LAPGFRFHPTDEEIVRYYLRRKVSGKPLCF-DTISVVDIYKSEPWDLPEksKLRTRDLEWYFFSPLDKKYSNSSRTNRATENGYWKTTGKDRPVR 101 579**********************988.89**********95246666777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_022990303.1 102 H-NSRVVGMKKTLVYHSGRAPRGARSNWVMHEYRL 135 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MGRDSTSLAP GFRFHPTDEE IVRYYLRRKV SGKPLCFDTI SVVDIYKSEP WDLPEKSKLR 60 TRDLEWYFFS PLDKKYSNSS RTNRATENGY WKTTGKDRPV RHNSRVVGMK KTLVYHSGRA 120 PRGARSNWVM HEYRLTDEDL EKAGVVQDAF VLCRIFQKSG SGPKNGEQYG APFIEEEWEN 180 DEELTLPGEE AVVNEGLVNV DDDMHLEVDE IVQCLDGELP FEYDQPLSNY LQDTINPVEL 240 PNVLVENDNK PLELQHNHGF FQLPEQYEMG GNSEKDKCFA ESSDNLKDED IDYLLDEPYP 300 SVPDDLALNE ELFLEANDLS SPVETDPTGF DILEEYLTFF DADDNLQLSF DPTELLGSEV 360 PISGQTIPEE KVNEVAENEF LATKQTSVAS INDASTSKLN TQADEAGSDS TLPFLKCVGY 420 LLGDIPAPPA FASEYPSKDM AIWLNSAAQT SSSIHRTAGM IHISNSTSNY DLVNTLYGKN 480 GDVDLILFSA GHHHHGENDE MIDALSQKNG IMGTRGGFLF FFLLFWVLIL SVSYKVGRCI 540 YSH

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MGRDSTSLAP GFRFHPTDEE IVRYYLRRKV SGKPLCFDTI SVVDIYKSEP WDLPEKSKLR  60
TRDLEWYFFS PLDKKYSNSS RTNRATENGY WKTTGKDRPV RHNSRVVGMK KTLVYHSGRA  120
PRGARSNWVM HEYRLTDEDL EKAGVVQDAF VLCRIFQKSG SGPKNGEQYG APFIEEEWEN  180
DEELTLPGEE AVVNEGLVNV DDDMHLEVDE IVQCLDGELP FEYDQPLSNY LQDTINPVEL  240
PNVLVENDNK PLELQHNHGF FQLPEQYEMG GNSEKDKCFA ESSDNLKDED IDYLLDEPYP  300
SVPDDLALNE ELFLEANDLS SPVETDPTGF DILEEYLTFF DADDNLQLSF DPTELLGSEV  360
PISGQTIPEE KVNEVAENEF LATKQTSVAS INDASTSKLN TQADEAGSDS TLPFLKCVGY  420
LLGDIPAPPA FASEYPSKDM AIWLNSAAQT SSSIHRTAGM IHISNSTSNY DLVNTLYGKN  480
GDVDLILFSA GHHHHGENDE MIDALSQKNG IMGTRGGFLF FFLLFWVLIL SVSYKVGRCI  540
YSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-128	NAC family protein