PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990302.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 544aa MW: 61306 Da PI: 4.2561

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.5	2.1e-52	8	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdee+v +yL++kv+gk+l + ++i+ vdiyk+ePwdLp+ k+++++ ewyfFs+ dkky++++r+nrat++gyWk+tgkd++v XP_022990302.1 8 LAPGFRFHPTDEEIVRYYLRRKVSGKPLCF-DTISVVDIYKSEPWDLPEksKLRTRDLEWYFFSPLDKKYSNSSRTNRATENGYWKTTGKDRPVR 101 579**********************988.89**********95246666777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_022990302.1 102 H-NSRVVGMKKTLVYHSGRAPRGARSNWVMHEYRL 135 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MGRDSTSLAP GFRFHPTDEE IVRYYLRRKV SGKPLCFDTI SVVDIYKSEP WDLPEKSKLR 60 TRDLEWYFFS PLDKKYSNSS RTNRATENGY WKTTGKDRPV RHNSRVVGMK KTLVYHSGRA 120 PRGARSNWVM HEYRLTDEDL EKAGVVQDAF VLCRIFQKSG SGPKNGEQYG APFIEEEWEN 180 DEELTLPGEE AVVNEGLVNV DDDMHLEVDE IVQQCLDGEL PFEYDQPLSN YLQDTINPVE 240 LPNVLVENDN KPLELQHNHG FFQLPEQYEM GGNSEKDKCF AESSDNLKDE DIDYLLDEPY 300 PSVPDDLALN EELFLEANDL SSPVETDPTG FDILEEYLTF FDADDNLQLS FDPTELLGSE 360 VPISGQTIPE EKVNEVAENE FLATKQTSVA SINDASTSKL NTQADEAGSD STLPFLKCVG 420 YLLGDIPAPP AFASEYPSKD MAIWLNSAAQ TSSSIHRTAG MIHISNSTSN YDLVNTLYGK 480 NGDVDLILFS AGHHHHGEND EMIDALSQKN GIMGTRGGFL FFFLLFWVLI LSVSYKVGRC 540 IYSH

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MGRDSTSLAP GFRFHPTDEE IVRYYLRRKV SGKPLCFDTI SVVDIYKSEP WDLPEKSKLR  60
TRDLEWYFFS PLDKKYSNSS RTNRATENGY WKTTGKDRPV RHNSRVVGMK KTLVYHSGRA  120
PRGARSNWVM HEYRLTDEDL EKAGVVQDAF VLCRIFQKSG SGPKNGEQYG APFIEEEWEN  180
DEELTLPGEE AVVNEGLVNV DDDMHLEVDE IVQQCLDGEL PFEYDQPLSN YLQDTINPVE  240
LPNVLVENDN KPLELQHNHG FFQLPEQYEM GGNSEKDKCF AESSDNLKDE DIDYLLDEPY  300
PSVPDDLALN EELFLEANDL SSPVETDPTG FDILEEYLTF FDADDNLQLS FDPTELLGSE  360
VPISGQTIPE EKVNEVAENE FLATKQTSVA SINDASTSKL NTQADEAGSD STLPFLKCVG  420
YLLGDIPAPP AFASEYPSKD MAIWLNSAAQ TSSSIHRTAG MIHISNSTSN YDLVNTLYGK  480
NGDVDLILFS AGHHHHGEND EMIDALSQKN GIMGTRGGFL FFFLLFWVLI LSVSYKVGRC  540
IYSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-128	NAC family protein