PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022989827.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 287aa    MW: 32288.4 Da    PI: 8.0122
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022989827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.55.4e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd  lv +++++G+g+W+++++  g+ R+ k+c++rw +yl
   XP_022989827.1 14 KGPWTPEEDIVLVSYIQEHGPGNWRAVPANTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding50.16.5e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T +E++ +v++ ++lG++ W++Ia++++  Rt++++k++w+++l
   XP_022989827.1  67 RGNFTDQEEKMIVHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MGRPPCCDKN GVKKGPWTPE EDIVLVSYIQ EHGPGNWRAV PANTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TDQEEKMIVH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLRKVQ  120
VSSMGHFGDG FSSSSSSMPR GQWEKRLQTD IRMARQALWE ALTPQNSTPF AEIKPSVHHK  180
VQATGYASST ENIAKLLTGW MKNPPKTTAE RCPNGGNSGG GADECEDNIG SFFRFECFET  240
SKSNSEEMKA DPDVHDLPLS MLEKWLFEES GGILQGREDH CLDDIGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.11e-105MYB family protein