PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022989794.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 282aa    MW: 33099 Da    PI: 9.2887
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022989794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.5e-172267147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v ++G  +W++Ia++++ gR++k+c++rw++ 
   XP_022989794.1 22 RGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQ-GRSGKSCRLRWFNQ 67
                     899*****************************.***********996 PP
2Myb_DNA-binding60.73.1e-1974117146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r+++++eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ 
   XP_022989794.1  74 RKPFSEEEEERLLAAHQIHGNK-WSLIARLFP-GRTDNAVKNHWHV 117
                      789*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MMMKDSGLDH HVDYEYKSSC SRGHWRPAED EKLRQLVDKY GAQNWNSIAQ KLQGRSGKSC  60
RLRWFNQLDP RIIRKPFSEE EEERLLAAHQ IHGNKWSLIA RLFPGRTDNA VKNHWHVIMA  120
RKQRERSKLC GSKRTFQEFS ASNFPENQTE SLGTYNINDN NNSFLELQNS HKDGTVWNFR  180
HYLKGSNNNN IPILHDTYHK FRTPSSALVC YPNHKIPFGV YEFGSNSEVI KRELAFVNFI  240
ANADRRRHYH HRLLHDQERQ EDESLTDKDV PFIDFLGVGV SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.18e-68MYB family protein