PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022989063.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 248aa MW: 27630.4 Da PI: 8.7578

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022989063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++k +G g+W++ +r g+ R++k+c++rw +yl XP_022989063.1 14 KGAWTKEEDDRLIAYIKAHGEGCWRSLPRAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	56.3	7.5e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T++Ede +++++ +lG++ W++Ia +++ gRt++++k++w+++ XP_022989063.1 67 RGNFTEDEDEVIIKLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDDRLIAYIK AHGEGCWRSL PRAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEDEDEVIIK LHSLLGNRWS LIAGRLPGRT DNEIKNYWNT HIKRKLLSQG 120 IDPTTHRAIV DPSSPATTIS FASNSAVEDQ EDRKKPVINS SPTEKQHLLD LNLDLKISPP 180 YPVAAGAAMK NEGRNSVCFS CSLGFENSKD CRCGNGKNNI IASSDNSKGF DFLGLKSCVL 240 DCRTLEIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	1e-105	MYB family protein