PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022988952.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 206aa MW: 23401.4 Da PI: 5.8166 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31 | 4.7e-10 | 20 | 68 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55 ++E++RR+++++ ++L +llP+ + +++ ls + +Av+YIk+L+ XP_022988952.1 20 RIIEKNRRNQMKTLCSQLNSLLPNqD---SKEIsLSLPDQIDEAVKYIKELE 68 68**********************66...77778***************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MDRHFQFSTS SSSAAKIERR IIEKNRRNQM KTLCSQLNSL LPNQDSKEIS LSLPDQIDEA 60 VKYIKELEKK VNLAKEKKEK LEGKNKSPMN IESSSSCSAS PQLKIHQSGR SLEIILSSGL 120 DNQYLFSETI SILQKEGVEV VNASFSVSGS SVFQTFHAQL EGSIIEFEAA KVTERLKRLV 180 YGSNSDMELQ KEKQWWDEFP SDDLDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 3e-16 | bHLH family protein |