PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022988914.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 249aa MW: 28266.3 Da PI: 8.0401 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.7 | 4.2e-16 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd++l+ +v+++G +W++ ++ g+ R++k+c++rw +yl XP_022988914.1 15 KGVWTLEEDQKLISYVNRYGHWNWRRLPKFAGLSRCGKSCRLRWMNYL 62 799*****************99************************97 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.5e-15 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g +++ E+e++v+ + Gg+ W+t a+ m+ gRt++++k++w+++l XP_022988914.1 68 KGGFSKKEEEIIVKMYAAIGGR-WSTMASLMP-GRTDNHIKNHWNTVL 113 5779******************.*********.************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MAKCCCCCDR TQVKKGVWTL EEDQKLISYV NRYGHWNWRR LPKFAGLSRC GKSCRLRWMN 60 YLRPDIRKGG FSKKEEEIIV KMYAAIGGRW STMASLMPGR TDNHIKNHWN TVLKRRVLQK 120 NVSRTMANKP PPPPPPPPSP PLPPATTSPI HEGFSGESLS SNDNSTLIID STALESVLIQ 180 TIETPTAGNI DMLPANDRPP VSSSGDFWTD PLWLDSDFDL PFDYQYQGLG EPIVSKFGLD 240 EYIFQEELY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28110.1 | 1e-51 | MYB family protein |