PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988622.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 624aa MW: 69094 Da PI: 5.4016

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.6e-32	139	195	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers d++++ei+Y+g H h XP_022988622.1 139 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSL-DGQITEIIYKGAHIHA 195 7**************************************.************97 PP
2	WRKY	103.3	1.4e-32	364	421	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vkg+++prsYY+CtsagC v+k+ver+++d k+v++tYeg+Hnhe XP_022988622.1 364 EDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCAVRKHVERASHDLKCVITTYEGKHNHE 421 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
MPEDGSSHGS EDSYFRFTPH GELNTLQSLF RLENQEADID RQAFESEKAL MDFEFLTDFS 60 KEGSVLKYDI ASSTGNNHFD GKSVNGNCDN MESCLSAIAH NQPSTPEESA KRDDSETQHP 120 LEGEQKGSCI PMGMLRTSED GYNWRKYGQK QVKGSEYPRS YYKCTHPNCQ VKKKVERSLD 180 GQITEIIYKG AHIHAKPDPN RRAMLGSMLM PDDTPEIGEG GGNRAKVEAG LTWRNTQYGV 240 KDTKPISDWS VDGLERTSSI SVVTELSDPL LNPQGKNVGV FESVGTPELS STLASHDDDG 300 SGGGDDDDLT TQGSISVCIE ADDAEPELKR RRKEGGSIET NLASRSLREP RVVVQIETDV 360 DILEDGYRWR KYGQKVVKGN PNPRSYYKCT SAGCAVRKHV ERASHDLKCV ITTYEGKHNH 420 EVPAARNGSQ VNSSNGNSQP STSHVQPNMD LSRNSNVTNS ESQIQDLAAQ FYSKPEFNYD 480 YQRSGCFDTF RNDIKLGAPS FCQMKFPQLR HTLPYSSFGL NSKHTSTSIS SSLASVVPDF 540 PISLPLNQNF SAAGFDFTNG RSIPPFQVFL SGQQLRETDR FLTPKQEHDD DNIRASFQPI 600 VDSSSGSSSS LVSSVYQHIM GNFP

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

MPEDGSSHGS EDSYFRFTPH GELNTLQSLF RLENQEADID RQAFESEKAL MDFEFLTDFS  60
KEGSVLKYDI ASSTGNNHFD GKSVNGNCDN MESCLSAIAH NQPSTPEESA KRDDSETQHP  120
LEGEQKGSCI PMGMLRTSED GYNWRKYGQK QVKGSEYPRS YYKCTHPNCQ VKKKVERSLD  180
GQITEIIYKG AHIHAKPDPN RRAMLGSMLM PDDTPEIGEG GGNRAKVEAG LTWRNTQYGV  240
KDTKPISDWS VDGLERTSSI SVVTELSDPL LNPQGKNVGV FESVGTPELS STLASHDDDG  300
SGGGDDDDLT TQGSISVCIE ADDAEPELKR RRKEGGSIET NLASRSLREP RVVVQIETDV  360
DILEDGYRWR KYGQKVVKGN PNPRSYYKCT SAGCAVRKHV ERASHDLKCV ITTYEGKHNH  420
EVPAARNGSQ VNSSNGNSQP STSHVQPNMD LSRNSNVTNS ESQIQDLAAQ FYSKPEFNYD  480
YQRSGCFDTF RNDIKLGAPS FCQMKFPQLR HTLPYSSFGL NSKHTSTSIS SSLASVVPDF  540
PISLPLNQNF SAAGFDFTNG RSIPPFQVFL SGQQLRETDR FLTPKQEHDD DNIRASFQPI  600
VDSSSGSSSS LVSSVYQHIM GNFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-83	WRKY family protein