PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022988607.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 217aa MW: 24023 Da PI: 6.6634 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 106.6 | 3e-33 | 4 | 129 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev..diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrF+Pt+eelv eyLk kv + l++ ++i+e+ +++++Pwd+p + e++ y Fsk+++ +r+ r sgyWka+g++++++ XP_022988607.1 4 LPPGFRFEPTEEELVFEYLKCKVFSFALPA-SIIPETttSVCNLDPWDIPGG-GGWEEDAYLFSKNQEC----DRRVRWSPSGYWKAKGSERKIV 92 79**************************99.556665468**********43.4456789****98775....48899999************** PP NAM 94 skkgel...vglkktLvfykgrapkgektdWvmheyrl 128 s+++ + vg++ktLvf+ g++++ +kt Wvmheyrl XP_022988607.1 93 SSSSDAvglVGMRKTLVFWMGSSSS-RKTGWVMHEYRL 129 *844435559*********998877.8*********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 217 aa Download sequence |
MRGLPPGFRF EPTEEELVFE YLKCKVFSFA LPASIIPETT TSVCNLDPWD IPGGGGWEED 60 AYLFSKNQEC DRRVRWSPSG YWKAKGSERK IVSSSSDAVG LVGMRKTLVF WMGSSSSRKT 120 GWVMHEYRLL LSPTQAPTPP SVVINNMEKW VVCRIVCNNS GIKNDLHFHP LQYPVSASTN 180 DDTNALSDDS VSSTASSSSF SATTTMPFPN HHSSASN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13180.1 | 4e-37 | NAC family protein |