PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022988606.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 218aa MW: 24080 Da PI: 6.6634 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 106.9 | 2.4e-33 | 4 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev..diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrF+Pt+eelv eyLk kv + l++ ++i+e+ +++++Pwd+p + e++ y Fsk+++ +r+ r sgyWka+g++++++ XP_022988606.1 4 LPPGFRFEPTEEELVFEYLKCKVFSFALPA-SIIPETttSVCNLDPWDIPGGGGGWEEDAYLFSKNQEC----DRRVRWSPSGYWKAKGSERKIV 93 79**************************99.556665468**********6656667789****98775....48899999************** PP NAM 94 skkgel...vglkktLvfykgrapkgektdWvmheyrl 128 s+++ + vg++ktLvf+ g++++ +kt Wvmheyrl XP_022988606.1 94 SSSSDAvglVGMRKTLVFWMGSSSS-RKTGWVMHEYRL 130 *844435559*********998877.8*********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MRGLPPGFRF EPTEEELVFE YLKCKVFSFA LPASIIPETT TSVCNLDPWD IPGGGGGWEE 60 DAYLFSKNQE CDRRVRWSPS GYWKAKGSER KIVSSSSDAV GLVGMRKTLV FWMGSSSSRK 120 TGWVMHEYRL LLSPTQAPTP PSVVINNMEK WVVCRIVCNN SGIKNDLHFH PLQYPVSAST 180 NDDTNALSDD SVSSTASSSS FSATTTMPFP NHHSSASN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 4e-36 | NAC family protein |