PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988389.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 356aa MW: 40542.5 Da PI: 5.4202

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988389.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.9	6.4e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v ++G+ +W++ +++ g++R++k+c++rw +yl XP_022988389.1 14 RGLWTAEEDAKILAYVSKHGTSNWTSAPKKAGLRRCGKSCRLRWTSYL 61 788*****************************************9996 PP
2	Myb_DNA-binding	46.1	1.1e-14	69	110	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T++E+el++++++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022988389.1 69 NFTPQEEELIIRLHAAIGSR-WAIIAQQLP-GRTDNDVKNYWNT 110 79****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MVRIPCCDKL NLKRGLWTAE EDAKILAYVS KHGTSNWTSA PKKAGLRRCG KSCRLRWTSY 60 LRPDLKHHNF TPQEEELIIR LHAAIGSRWA IIAQQLPGRT DNDVKNYWNT KLRKKLSEMG 120 IDPVTHKPFS QILADYGNIG GLPRSTNRIG SLSRDLKTSP YMKPNSAQEL YRGIDVSMST 180 PTMLLPETEP SIDKFMNGNV HQLNINPSLN LLAQLQAMQL VTEASHCTSN EPIQPHFNTQ 240 GYLPSSSSSS SSAFIWQDFL LEDAFLPSEP REHENVAEFP LNQNAFQTQN GISKEEMNEE 300 KSEYQYDRFE AMHSLTENDD AEASSSTENT FIETLFHQED NILFDFLNLL DEPLYD

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MVRIPCCDKL NLKRGLWTAE EDAKILAYVS KHGTSNWTSA PKKAGLRRCG KSCRLRWTSY  60
LRPDLKHHNF TPQEEELIIR LHAAIGSRWA IIAQQLPGRT DNDVKNYWNT KLRKKLSEMG  120
IDPVTHKPFS QILADYGNIG GLPRSTNRIG SLSRDLKTSP YMKPNSAQEL YRGIDVSMST  180
PTMLLPETEP SIDKFMNGNV HQLNINPSLN LLAQLQAMQL VTEASHCTSN EPIQPHFNTQ  240
GYLPSSSSSS SSAFIWQDFL LEDAFLPSEP REHENVAEFP LNQNAFQTQN GISKEEMNEE  300
KSEYQYDRFE AMHSLTENDD AEASSSTENT FIETLFHQED NILFDFLNLL DEPLYD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	6e-71	MYB family protein