PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988384.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 254aa MW: 29171.1 Da PI: 9.0226

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.4	6.6e-13	12	57	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +grW+ eEde l ++v+++G+++W++ ++ + Rt+k+c++rw + XP_022988384.1 12 KGRWSVEEDEVLMNYVNEFGPRDWSSLRSKRLLPRTGKSCRLRWVN 57 79**********************98877778********87 PP
2	Myb_DNA-binding	43	1e-13	68	109	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++++E+ l ++ +q+G++ W++Ia +++ gRt++++k++w + XP_022988384.1 68 KFSADEERLVTELQAQFGNK-WAKIATYFP-GRTDNDVKNFWST 109 79****************.*****.*********65 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MERKRDGTQM KKGRWSVEED EVLMNYVNEF GPRDWSSLRS KRLLPRTGKS CRLRWVNKLQ 60 PNLKTGCKFS ADEERLVTEL QAQFGNKWAK IATYFPGRTD NDVKNFWSTR RKSLGRRILQ 120 TPPQKSQKHN QKISESQRLH HVLPDLEVPT SVSSQLEKRS STWNDHVEKE FELGNTEMHK 180 MALLSVQSNM IAMETENQIF GTPSVHMLAP FDPFPHCCIS QITQSSQEIG MVPDCLGLSP 240 HHIASNLQDG LEPG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	3e-59	MYB family protein