PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988283.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 574aa MW: 65819.3 Da PI: 5.045

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.00098	545	563	2	20
EETTTTEEESSHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHi 20 +C+ Cg+ F ++ L++H+ XP_022988283.1 545 SCETCGEQFESRNKLHKHL 563 6*****************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MASGKRCHYE VLGLHIDCTA DEIRSAYRKL ALQRHPDKLV QSGLSQSDAT AQFQELQHAY 60 EVLSDPKERA WYDSHRSQIL FSDAGSVNSN SVPNLFPFFS NTVYSGYSDS GRGFYKIYSD 120 IFDKIYGNEI NFAKKLGLRL DTVRNAPVMG NLDAPYTQVT AFYNYWLGFC TVMDFCWVDQ 180 YDVMAGPNRK SRRLMEEDNN KLRKKAKREY NETVRGLAEF VKKRDKRVTD MAMKRNIEME 240 KKKEEERERK KKLEREKMEK LKAFEEADWA KVEEIEEDPE DESEEEKRAK ELYCVLCGKK 300 FKSEKQWKNH EQSKKHKEKV AEFKESLDDE EESEEFVDEG QDEEEATLLD VGIDKLEEQF 360 KESFDIEAEE AESGAELSGS EYYDVHDVDR SDIVAEELGS NDDDNETDIL EAMAAGLRNR 420 KNAASLNQPK ASSDKAHFEN ENDEPNPSEF ENVRRGGKNR RAKKNGKGND EARNETEPDS 480 QNDKNNGDDT SYQQDSPSNS LAKEQRNSTQ PADRKAVAQK DTKTNSRNSS KGKKSKATSK 540 DSGNSCETCG EQFESRNKLH KHLGATGHAA LKYR

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MASGKRCHYE VLGLHIDCTA DEIRSAYRKL ALQRHPDKLV QSGLSQSDAT AQFQELQHAY  60
EVLSDPKERA WYDSHRSQIL FSDAGSVNSN SVPNLFPFFS NTVYSGYSDS GRGFYKIYSD  120
IFDKIYGNEI NFAKKLGLRL DTVRNAPVMG NLDAPYTQVT AFYNYWLGFC TVMDFCWVDQ  180
YDVMAGPNRK SRRLMEEDNN KLRKKAKREY NETVRGLAEF VKKRDKRVTD MAMKRNIEME  240
KKKEEERERK KKLEREKMEK LKAFEEADWA KVEEIEEDPE DESEEEKRAK ELYCVLCGKK  300
FKSEKQWKNH EQSKKHKEKV AEFKESLDDE EESEEFVDEG QDEEEATLLD VGIDKLEEQF  360
KESFDIEAEE AESGAELSGS EYYDVHDVDR SDIVAEELGS NDDDNETDIL EAMAAGLRNR  420
KNAASLNQPK ASSDKAHFEN ENDEPNPSEF ENVRRGGKNR RAKKNGKGND EARNETEPDS  480
QNDKNNGDDT SYQQDSPSNS LAKEQRNSTQ PADRKAVAQK DTKTNSRNSS KGKKSKATSK  540
DSGNSCETCG EQFESRNKLH KHLGATGHAA LKYR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	226	RKSRRLMEEDNNKLRKKAKREYNETVRGLAEFVKKRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	1e-149	C2H2 family protein