PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988024.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 877aa MW: 99092.5 Da PI: 6.1734

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988024.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.6	1.5e-16	60	132	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 Y+eYA+++GFs + + ++sk +g i++r+fvC +e ++++ + C+a+l++++++++kw+vtk+++eH+H+ XP_022988024.1 60 LYDEYARRIGFSSKLGQLSRSKSDGIIISREFVCARECSERKPAGS--------------CDAMLRIELKDQDKWVVTKFVKEHSHS 132 6**********************************999988776..............************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 877 aa Download sequence
MDEMVRVDGL AHPAVVDDSD VDPHEGEINT AEDSAFHDED GIIEPYEGME FESEGDAKTL 60 YDEYARRIGF SSKLGQLSRS KSDGIIISRE FVCARECSER KPAGSCDAML RIELKDQDKW 120 VVTKFVKEHS HSTVNSSKVH YIRPRRHFAG AAKTMTEAYT GSAGVPSGVM SVLMDDNRAP 180 AGKTRGGWKT SQAEANRSLN NASTMNYPIR NAGQKRTLGR DAQNMLEYFK KMQSENPGFF 240 YAIQLDEDNR MANVFWADAR SRAAYSHFGD AVTLDTMYRV NQFRVPFAPF TGVNHHGQTI 300 LFGCALLLDE SEASFVWLFK TFLTAMNNRQ PVSVTTDQDR AIHVAIAQVF PDARHCISKW 360 HVLREGQQKL AHVCLTYPNF QVELYNCINL TETIEEFESA WNCIIEKYNL GRSDWLQSLY 420 NARAQWVPVY VRDSFFAVIS PNQGYDNSFF DGYVNQQTTL PLFFRQYETA LENWFEKEIE 480 ADFDTMCTTP VLRTPSPMEK QAANLYTRKI FAKFQEELVE TFVYTANRIE GDATLGTFRV 540 AKFEDDQKAY VVTLNYPDMR ANCSCQMFEY SGILCRHVLT VFTVTNVLTL PSHFILRRWT 600 RNARNGLGSD ERAIELHGQE SLSSRYNNLC REAIRYAEEG ATAPETYNLA MTALKEAGKE 660 VATVKKNIAK VAPPSSQVSG GAGYDERKTS ASASDTTPLL WPRQDEVMRR FNLNDAGAHV 720 QSIADLNYPH IAPVSLHRDD NPPDHVAVLP YLKSMTWVME NKNSTTGNRV AVINLKLQDY 780 SKSPSAESEV KFQLSRVSLE PMLRSMAYIS EQLSTPANKV AVINLKLQDT ETTSGESEVK 840 FQVSRDTLGA MLRSMAYIRE QLSNAAESEP LPKKQRK

Sequence ? help Back to Top

Protein Sequence Length: 877 aa Download sequence

MDEMVRVDGL AHPAVVDDSD VDPHEGEINT AEDSAFHDED GIIEPYEGME FESEGDAKTL  60
YDEYARRIGF SSKLGQLSRS KSDGIIISRE FVCARECSER KPAGSCDAML RIELKDQDKW  120
VVTKFVKEHS HSTVNSSKVH YIRPRRHFAG AAKTMTEAYT GSAGVPSGVM SVLMDDNRAP  180
AGKTRGGWKT SQAEANRSLN NASTMNYPIR NAGQKRTLGR DAQNMLEYFK KMQSENPGFF  240
YAIQLDEDNR MANVFWADAR SRAAYSHFGD AVTLDTMYRV NQFRVPFAPF TGVNHHGQTI  300
LFGCALLLDE SEASFVWLFK TFLTAMNNRQ PVSVTTDQDR AIHVAIAQVF PDARHCISKW  360
HVLREGQQKL AHVCLTYPNF QVELYNCINL TETIEEFESA WNCIIEKYNL GRSDWLQSLY  420
NARAQWVPVY VRDSFFAVIS PNQGYDNSFF DGYVNQQTTL PLFFRQYETA LENWFEKEIE  480
ADFDTMCTTP VLRTPSPMEK QAANLYTRKI FAKFQEELVE TFVYTANRIE GDATLGTFRV  540
AKFEDDQKAY VVTLNYPDMR ANCSCQMFEY SGILCRHVLT VFTVTNVLTL PSHFILRRWT  600
RNARNGLGSD ERAIELHGQE SLSSRYNNLC REAIRYAEEG ATAPETYNLA MTALKEAGKE  660
VATVKKNIAK VAPPSSQVSG GAGYDERKTS ASASDTTPLL WPRQDEVMRR FNLNDAGAHV  720
QSIADLNYPH IAPVSLHRDD NPPDHVAVLP YLKSMTWVME NKNSTTGNRV AVINLKLQDY  780
SKSPSAESEV KFQLSRVSLE PMLRSMAYIS EQLSTPANKV AVINLKLQDT ETTSGESEVK  840
FQVSRDTLGA MLRSMAYIRE QLSNAAESEP LPKKQRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein