PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022987709.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HRT-like | ||||||||
Protein Properties | Length: 478aa MW: 53552 Da PI: 9.9318 | ||||||||
Description | HRT-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HRT-like | 50.2 | 4.2e-16 | 268 | 297 | 2 | 31 |
HRT-like 2 CGviledGsvCkrqPvkgRKRCeeHKGmRi 31 CGv ++ G vC+++Pv+gRKRC+eHKGm++ XP_022987709.1 268 CGVVIGYGVVCRKPPVEGRKRCAEHKGMKV 297 ****************************97 PP | |||||||
2 | HRT-like | 62.9 | 4.7e-20 | 345 | 375 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG+ l dGs+C+r+Pv+gRKRCeeHKG+Ri XP_022987709.1 345 ICGIVLYDGSPCRRTPVQGRKRCEEHKGQRI 375 8*****************************7 PP | |||||||
3 | HRT-like | 53.4 | 4.4e-17 | 430 | 459 | 2 | 31 |
HRT-like 2 CGviledGsvCkrqPvkgRKRCeeHKGmRi 31 CGv l++G C+rqPvkgR RC eHKGmRi XP_022987709.1 430 CGVDLGNGLYCTRQPVKGRVRCGEHKGMRI 459 *****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 478 aa Download sequence |
MVAEFSSTRL KRENCKRTKH DSNFSKWEIL VAPSDWEDYS LGKEGAERYR IHNLPKVSGP 60 GLYELGIAVS SSGLGREIAK LDADWIVVVY IGEADNVRTR LQHYGRSGSH LGNGYLCFVD 120 CKVIPLEKGP GLFQEMFTRG YSILYRWAPM KNKRDAQMTE AQLLKTFDYA WNTSGNGARR 180 HNDVLKKLED IASQTKKFTI ITRKLLPFRQ KQMGIKIKTS KPIPTENKTG EYGEERSSFF 240 SRILHFSRSR PRLVVNTDDV SGADSSSCGV VIGYGVVCRK PPVEGRKRCA EHKGMKVNGL 300 LKNSYAGATI YGDTDFSGSN AETSYNTEEL SVQDSFPNKG NFLPICGIVL YDGSPCRRTP 360 VQGRKRCEEH KGQRIRRSTL TSCQEAKPKV LLDVITSQYK QQTSPTSKQE SILIAQDNSP 420 DLNSSLERKC GVDLGNGLYC TRQPVKGRVR CGEHKGMRIN GLISRLATVS DTISVRKH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56780.1 | 1e-110 | HRT-like family protein |