PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022987311.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 310aa MW: 33706.6 Da PI: 8.1628 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.7 | 5.3e-08 | 8 | 61 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT..........-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..........tWktIartmgkgRtlkqcksrwqky 47 WT+eEd+ + +a++ g W+ Ia++++ ++ +++k ++q++ XP_022987311.1 8 TWTKEEDKAFENAIATRWAGelegnktseeMWENIASMVP-TKNMEDLKQHYQML 61 6*************877666789999**************.************86 PP | |||||||
2 | Myb_DNA-binding | 38.9 | 2.1e-12 | 146 | 190 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky XP_022987311.1 146 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 190 7*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MSTGSATTWT KEEDKAFENA IATRWAGELE GNKTSEEMWE NIASMVPTKN MEDLKQHYQM 60 LVEDVGAIES GQIPIPNYDS VAEEATKAST KAKDHYLHPH GATGSDSNKI PNSGFGSGFS 120 RLSHDSSAQA TKGGSRSEQE RKKGIPWTEE EHRLFLLGLD KFGKGDWRSI SRNFVISRTP 180 TQVASHAQKY FIRLNSMNRD RRRSSIHDIT SVNNGGGDVM SHQSPITGHQ TNGPNQSNPP 240 ALGPPGKHGP QQHLPGIGMY GAPVGHPVAA RPGHMASAVG TPVMLPHGIH PHPPYVMPLA 300 YPMAPPPLHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49010.1 | 4e-73 | MYB family protein |