PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987026.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SRS

Protein Properties

Length: 371aa MW: 38335.2 Da PI: 7.3405

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	212.7	8.6e-66	152	309	3	153
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 s t++CqdCGnqakkdC+ RCRtCC+srgfdCathvkstWvpaa+rrerq ++ + ++ + +s +++ +k++r +++++s+t++s+++++ XP_022987026.1 152 SATTTCQDCGNQAKKDCSRGRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSGSASGTKKPRLI---ASQTTSHTSTSNTTPP 243 57899*******************************************99999999999999999999999986...5566677777888888 PP DUF702 98 keletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 +++tss lP +++++avf+cvrv++vddge+e+aYq++v+igGhvfkG+LydqG++ XP_022987026.1 244 GSIDTSSshqdagfkeeLPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFLYDQGVD 309 88888877889999999*********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MWSAAAAAQR SLNYGLGSEM GMVGLRDVYV VAPAASFNPN PHHHDPNLIS DDHSLAVSNS 60 ATALGVGVGV GVIPLLTAGP CLGVEEDNLL GSRSGSRGGG IQLWQQNQQS TQHYLKKTPS 120 SSLDHHLHNA SGTNDLIGGG IGVFGGLASS SSATTTCQDC GNQAKKDCSR GRCRTCCRSR 180 GFDCATHVKS TWVPAARRRE RQLMAITGTA ADGSSGSASG TKKPRLIASQ TTSHTSTSNT 240 TPPGSIDTSS SHQDAGFKEE LPGQIRAPAV FKCVRVTAVD DGEDEYAYQA VVKIGGHVFK 300 GFLYDQGVDA GDGFPNVSEL HLSDGGGGSR NNRNGSSAPF VDPSDVYNVA ASGNGGAPGF 360 LGGSNYGNQI R

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MWSAAAAAQR SLNYGLGSEM GMVGLRDVYV VAPAASFNPN PHHHDPNLIS DDHSLAVSNS  60
ATALGVGVGV GVIPLLTAGP CLGVEEDNLL GSRSGSRGGG IQLWQQNQQS TQHYLKKTPS  120
SSLDHHLHNA SGTNDLIGGG IGVFGGLASS SSATTTCQDC GNQAKKDCSR GRCRTCCRSR  180
GFDCATHVKS TWVPAARRRE RQLMAITGTA ADGSSGSASG TKKPRLIASQ TTSHTSTSNT  240
TPPGSIDTSS SHQDAGFKEE LPGQIRAPAV FKCVRVTAVD DGEDEYAYQA VVKIGGHVFK  300
GFLYDQGVDA GDGFPNVSEL HLSDGGGGSR NNRNGSSAPF VDPSDVYNVA ASGNGGAPGF  360
LGGSNYGNQI R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.4	2e-65	SRS family protein