PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022986989.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | YABBY | ||||||||
Protein Properties | Length: 177aa MW: 19393 Da PI: 9.2483 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 203.3 | 9.5e-63 | 6 | 157 | 5 | 160 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++e+vCyv+CnfCntilavsvP + +f++vtvrCGhC++llsvn+ ++q+l+ ++ + ++++ + ++++ s ++++s+s+ ++ XP_022986989.1 6 MAAERVCYVHCNFCNTILAVSVPCNNMFTLVTVRCGHCSNLLSVNMGASVQVLPPQDSQPGNKQQQVSGGDWSKDR--GSSSSSSSSSSKCTKIA 98 5789***************************************************997333333333333333333..33333333333333333 PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160 +l ++ +++ r+pp irPPek+qrvPsaynrfikeeiqrika+nPdishreafs+aakn XP_022986989.1 99 SL-DSAERDQHRIPP-IRPPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNV 157 33.344555566677.9******************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MSLEMMAAER VCYVHCNFCN TILAVSVPCN NMFTLVTVRC GHCSNLLSVN MGASVQVLPP 60 QDSQPGNKQQ QVSGGDWSKD RGSSSSSSSS SSKCTKIASL DSAERDQHRI PPIRPPEKKQ 120 RVPSAYNRFI KEEIQRIKAN NPDISHREAF STAAKNVSSR TSCSCTKLRS ESLKLLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 2e-54 | YABBY family protein |