PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986743.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-YC

Protein Properties

Length: 280aa MW: 31049.5 Da PI: 4.6667

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	60.3	4.2e-19	6	86	18	98
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 ++++P arikki++adedv +i+ +P l+ska elf+ +l r++ + + +t++ ++++++ ++fdfl d+v + XP_022986743.1 6 DTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHLKQCIQTFNVFDFLRDVVGK 86 5789*************************************************************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MKKKLDTRFP AARIKKIMQA DEDVGKIAMA VPLLVSKALE LFLQDLCDRT YEITLKRGAK 60 TMNSLHLKQC IQTFNVFDFL RDVVGKVPDL GASDAAEDRC ILKRRKVEDE DGGNDSEEES 120 KRSKTTEAGH NISGRGRGRG RGRGRGRSSR HSEKDTAIHS DNFEEDLEIP SHPGDNLDKT 180 VADNGVAEAR MENDNIPIDK AVEPSVRNFD LNVNLDEDGD LTSIPVAAST GSPVKPPTDS 240 KHDEYPGWSV AEMEKMVIDP IQLANLNKSI DDEEDYDEEG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	144	RGRGRGRGRG
2	135	145	RGRGRGRGRGR
3	137	146	RGRGRGRGRG
4	137	147	RGRGRGRGRGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G19490.1	8e-57	NF-YC family protein