PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986715.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 488aa MW: 53210.2 Da PI: 7.3266

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986715.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.4e-17	155	204	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022986715.1 155 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 204 78*****************......55**********************997 PP
2	AP2	40	9.4e-13	247	296	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkle 54 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ + + XP_022986715.1 247 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDKAAIQCN 296 89******.7**...5...334336******99*******98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MFDLNLNVDS PDATPNEDSV LFFEKLPQGS GNQMDESGTS NSSIVNADTS SNGGDDDSCS 60 TRAGGELFMI NFGILKSGSA NDVVTKELFP IGGTVNPDFG ILQGHNSACS SNSSRKNWIN 120 LAFDRSGSAG EGRMMQPVQP QPAKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV 180 YLGGFDTAHS AARAYDRAAI KFRGVDADIN FILSDYEEDL KQMKNLSKEE FVHILRRQST 240 GFSRGSSKYR GVTLHKCGRW EARMGQLLGK KYIYLGLFDS EVEAARAYDK AAIQCNGREA 300 VTNFEPSTYG ERVSEGSSEG CRIMLDLNLG ISPLSLDNYP KDNEGHLRFQ SGPCYANDRS 360 TMIESNADAA VGDPSLKGPV MATGHVPLWN GLQHSCLLPS EERVTDKRHA LGSSQGVVPN 420 WAWQIHNQVN ATQLPLFSAA ASSGFSFSAI PAAILPPRQP GSTAHNLHFT SAKASLNSPQ 480 LNPQQPPP

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MFDLNLNVDS PDATPNEDSV LFFEKLPQGS GNQMDESGTS NSSIVNADTS SNGGDDDSCS  60
TRAGGELFMI NFGILKSGSA NDVVTKELFP IGGTVNPDFG ILQGHNSACS SNSSRKNWIN  120
LAFDRSGSAG EGRMMQPVQP QPAKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV  180
YLGGFDTAHS AARAYDRAAI KFRGVDADIN FILSDYEEDL KQMKNLSKEE FVHILRRQST  240
GFSRGSSKYR GVTLHKCGRW EARMGQLLGK KYIYLGLFDS EVEAARAYDK AAIQCNGREA  300
VTNFEPSTYG ERVSEGSSEG CRIMLDLNLG ISPLSLDNYP KDNEGHLRFQ SGPCYANDRS  360
TMIESNADAA VGDPSLKGPV MATGHVPLWN GLQHSCLLPS EERVTDKRHA LGSSQGVVPN  420
WAWQIHNQVN ATQLPLFSAA ASSGFSFSAI PAAILPPRQP GSTAHNLHFT SAKASLNSPQ  480
LNPQQPPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-137	AP2 family protein