PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022985895.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 352aa MW: 39421.4 Da PI: 6.1958 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.8 | 9.2e-49 | 27 | 153 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+P+deel+ +yLkkk++g++ ++ +vi+e++i+k+ePwdLp k + +++ew+fFs+r +ky++g++++rat+ gyWkatgk+++v+s XP_022985895.1 27 MFPGFRFSPKDEELILFYLKKKLQGSDDSV-DVISEIEICKFEPWDLPGKSRIpSDNEWFFFSPRGRKYPNGTQNKRATELGYWKATGKERNVKS 120 579************************999.99***************543333789************************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e +g+k+tLvf+ grap+ge+t+W+mhey l XP_022985895.1 121 -GSEIIGTKRTLVFHLGRAPTGERTEWIMHEYCL 153 .9******************************87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 352 aa Download sequence |
MESKGKGKGK MGGVSREAEM SMAALSMFPG FRFSPKDEEL ILFYLKKKLQ GSDDSVDVIS 60 EIEICKFEPW DLPGKSRIPS DNEWFFFSPR GRKYPNGTQN KRATELGYWK ATGKERNVKS 120 GSEIIGTKRT LVFHLGRAPT GERTEWIMHE YCLNDTSQDS NSMVVCRLRK NNDFRRNNSD 180 KAGSSKVQGS GEDGDGGVGQ KVGGESDRLS KNCSSSFDSH SLEQIDSGIE FHRKETSDPA 240 LHESLSREKG NDEDEELYAD LLKDDIITLD DNLLSATQNP TPMIMNFSES EKYTHLPIPT 300 ALSEAEASPC QGSITRRIKL KKLERNNVYI NIGLLTFLLI IFIASLHVLC NL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G27300.1 | 3e-83 | NAC family protein |