PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022985610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 259aa MW: 28178.8 Da PI: 9.8714 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.7 | 1.5e-19 | 9 | 54 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ede l ++v+++G+++W++I++ ++ gR++k+c++rw++ XP_022985610.1 9 KGPWSPQEDEALRRLVRKYGPRNWSLISKSIP-GRSGKSCRLRWFNQ 54 79******************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 53.3 | 6.3e-17 | 63 | 105 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a +++G++ W+tIar + gRt++ +k++w++ XP_022985610.1 63 AFTAEEDETIINAQALYGNK-WATIARLLS-GRTDNAIKNHWNST 105 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MAKEIDRIKG PWSPQEDEAL RRLVRKYGPR NWSLISKSIP GRSGKSCRLR WFNQLSPQVE 60 HRAFTAEEDE TIINAQALYG NKWATIARLL SGRTDNAIKN HWNSTLKRKS GGCNTSSPPL 120 KSPSESDVSD SSFFPSLSSS HVYRPVARSG GVVPPCETVS ASNDPLTSLS LSLPGAESSE 180 VNFGDKSLPA IGGIWAEERN KNGFEIGGSD LMGVMQEMIR KEVRKYMGGL MEQKVGGGVC 240 VQQAAAGGFR SFVSVSKSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 4e-72 | MYB family protein |