PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022985148.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 229aa MW: 25691.9 Da PI: 8.8885 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50 | 6.6e-16 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l +v+ G ++W+ I++ + gR++k+c++rw++ XP_022985148.1 12 KGPWSPEEDEMLRMLVQSQGARNWSIISQSIH-GRSGKSCRLRWFNQ 57 79******************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 58 | 2.1e-18 | 64 | 108 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+eEde + +a++++G++ W+tIar ++ gRt++ +k++w++ XP_022985148.1 64 RRAFTAEEDEVITEAHAKYGNK-WATIARLLN-GRTDNAIKNHWNST 108 678*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MGSRKGNIDR VKGPWSPEED EMLRMLVQSQ GARNWSIISQ SIHGRSGKSC RLRWFNQLCP 60 GVERRAFTAE EDEVITEAHA KYGNKWATIA RLLNGRTDNA IKNHWNSTLK RKFCSIAEKK 120 TDCASQGSTI SVSNQCLSPS GSETSDSIRS SDMEPSTQLT LSLPGSELWP VTQQQSISSS 180 PRSEEKQKGK RTCFGEELLC VMQKMVKEEV RNYVAQYEGV RNGKKGIDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 5e-65 | MYB family protein |